ggKbase home page

PLM4_32_b1_sep16_scaffold_41_8

Organism: PLM4_32_b1_sep16_Flavobacteriales_Flavobacteriia_35_11

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 10129..11442

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.2
  • Coverage: 437.0
  • Bit_score: 844
  • Evalue 6.80e-242
MiaB-like tRNA modifying protein YliG (EC:1.3.1.74) similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 437.0
  • Bit_score: 829
  • Evalue 3.50e-238
MiaB-like tRNA modifying protein YliG Tax=Flavobacterium limnosediminis JC2902 RepID=V6SI80_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 437.0
  • Bit_score: 835
  • Evalue 2.20e-239

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium sp. AED → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1314
ATGAGAACGAAGTCTTTAAAGAAGAACAAAATAAATGTGATCACTCTTGGGTGTTCAAAAAATGTATATGACAGTGAAGTGCTAATGGGACAACTCCGTGCGAGCGGGAAAGAGGTTACCCACGAAGCCAAAGCCGAAGATGAAGGAAATATTATCGTGATTAATACCTGCGGATTTATTGATAATGCCAAGGCAGAATCAGTAAATATGATTTTGGAATATGCTGACAAGAAAGAAAAAGGACTTGTAGACAAGGTTTTTGTGACGGGTTGCTTATCTGAAAGATACAGACCGGATTTAGAAAAAGAAATCCCGAATGTCGATCAATACTTTGGAACTACTGAATTGCCTGCTTTATTGAAAGCTTTGGGTGCCGACTACAAGCATGAATTACTGGGCGAACGTTTGACAACAACTCCCAAAAATTACGCTTATTTAAAAATATCGGAAGGCTGTGACAGACCGTGTAGTTTTTGTGCGATTCCGTTAATGAGAGGAAAAAACGTTTCGCAAACCATTGAAAAACTGGTAAAAGAATCGGAAGGATTGGCCAAGAATGGCGTAAAAGAATTGATTTTGATCGCGCAAGACTTAACGTATTACGGTCTTGATTTGTATAAAAAACGGGCACTGGGCGAATTGCTGGAAGCTTTGGTAAAAGTAGAAGGTATCGAGTGGATTCGTTTGCACTACGCCTTCCCTACTGGTTTCCCGATGGACGTGCTGGAAATCATGAAACGCGAACCTAAGATTTGTAATTATATTGATATCCCGTTGCAACACATATCGGATTCTATTTTGAAATCGATGCGTCGTGGAACCACTCAAGAAAAAACAACACAATTATTAAAAGACTTTAGAGCAGCGGTTCCCGGAATGGCTATTCGTACGACTTTGATTGTGGGATATCCTGGAGAAACACAGGAAGATTTTAATATCTTGAAAGATTTTGTCCAAGAAATGAAGTTTGACAGAATGGGATGTTTTGCCTATTCACATGAAGAAAACACGCATGCTTATTTACTGGAAGACGATGTCCCGGACGAGGTAAAACAAGCCCGTGCCAATGAAATAATGGAATTGCAATCGCAAATTTCCTGGGATATGAATCAAGAGAAAGTGGGACAAACTTTTAGATGTATCATCGACAGAAAAGAAGGCGGTCATTTTGTGGGAAGAACCGAGTTTGATAGCCCGGATGTGGATAATGAAGTCTTGATAGACGCTACAAAACACTATGTAAAAACAGGTGAATTTGTAATGGTAAAAATCACTGAAGCGACCGAATTTGATTTGTACGGAGAACCGGTTTAG
PROTEIN sequence
Length: 438
MRTKSLKKNKINVITLGCSKNVYDSEVLMGQLRASGKEVTHEAKAEDEGNIIVINTCGFIDNAKAESVNMILEYADKKEKGLVDKVFVTGCLSERYRPDLEKEIPNVDQYFGTTELPALLKALGADYKHELLGERLTTTPKNYAYLKISEGCDRPCSFCAIPLMRGKNVSQTIEKLVKESEGLAKNGVKELILIAQDLTYYGLDLYKKRALGELLEALVKVEGIEWIRLHYAFPTGFPMDVLEIMKREPKICNYIDIPLQHISDSILKSMRRGTTQEKTTQLLKDFRAAVPGMAIRTTLIVGYPGETQEDFNILKDFVQEMKFDRMGCFAYSHEENTHAYLLEDDVPDEVKQARANEIMELQSQISWDMNQEKVGQTFRCIIDRKEGGHFVGRTEFDSPDVDNEVLIDATKHYVKTGEFVMVKITEATEFDLYGEPV*