ggKbase home page

PLM4_32_b1_sep16_scaffold_841_12

Organism: PLM4_32_b1_sep16_Flavobacteriales_Flavobacteriia_35_11

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(12128..12997)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region Tax=Flavobacterium sp. CF136 RepID=J3BX24_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 287.0
  • Bit_score: 441
  • Evalue 6.20e-121
TonB-dependent receptor {ECO:0000313|EMBL:KGD68330.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 289.0
  • Bit_score: 473
  • Evalue 1.60e-130
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 286.0
  • Bit_score: 427
  • Evalue 2.60e-117

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium aquatile → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 870
AAAGCGTTGGCTGCCGCTCCAATGGAAAAAAAGTATGATGTGTATTTGGAATTGAGAGAGACACAGGAAAACAATCCGAGCTTTTATTTTGACGTGGCCAATTATTTTTACAATTCAGGCAATAAAGAAAAGGGCTTATTGGTGTTGAGCAATATTGCCGATTTAGGTCTCGAAAATCATCAATTGTATAAATCACTTACTTATGTGCTTCGTCAATGGGAAGCTTATGAAGATGCTTTGTTTACGGCCAATCAAGTGGTAAAATGGCGCGAACACGAACCGCAAAGCCACAGAGATTTAGGACTGACACTGGAAGACAACAAACAATATCAAGCAGCTTTTGATGAATTGATTAAAGCATTAGAGGTCAATTATTATGGTGAAATGAGTGGACAATATGAAGGTGTTGAAGATATTATTTTGATGGACATCAACCGATTGGTAGCAGATCATCCTAGTGTAAAAACAGATAAATTAGACAAGAAATACATGGCTAAAATGCCTGTTGGAGTAAGAATAATTTTGAATTGGAATCAAATGGATACTGATATAGACTTACATATTATTGAACCTAACAAAGAGGAATGTTATTATGGACACAAAACGACAGAAGCAGGCGCTCGTTTTTCCAAGGATTTTACCCAAGGTTACGGACCGGAACAATATTTATTGCGTAATGGCATGAAAGGGAAATACCTTATCAGAACCAATTATTATGGAGAACGTAGTCTTACAGAAAATGGACCAACAACGGTAATGGTGGAGATTTATACTAAAAAAGCCAATGGAACTACGGTAAGAAAATTACAAACCATACAATTAGGAAAAATAAAAGAAAATCAAGATTTGGCTAACATTATAATAGATTAA
PROTEIN sequence
Length: 290
KALAAAPMEKKYDVYLELRETQENNPSFYFDVANYFYNSGNKEKGLLVLSNIADLGLENHQLYKSLTYVLRQWEAYEDALFTANQVVKWREHEPQSHRDLGLTLEDNKQYQAAFDELIKALEVNYYGEMSGQYEGVEDIILMDINRLVADHPSVKTDKLDKKYMAKMPVGVRIILNWNQMDTDIDLHIIEPNKEECYYGHKTTEAGARFSKDFTQGYGPEQYLLRNGMKGKYLIRTNYYGERSLTENGPTTVMVEIYTKKANGTTVRKLQTIQLGKIKENQDLANIIID*