ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM4_32_b1_sep16_scaffold_4108_15

Organism: PLM4_32_b1_sep16_Rokubacteria_71_14

near complete RP 50 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(11851..12300)

Top 3 Functional Annotations

Value Algorithm Source
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 63.1
  • Coverage: 141.0
  • Bit_score: 194
  • Evalue 4.00e-47
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 131.0
  • Bit_score: 131
  • Evalue 1.20e-28
Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 141.0
  • Bit_score: 194
  • Evalue 5.60e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGCCGTCGAGCCTGGCTGCGCCGATTCCCCCGCCCGTCGCCGGCTTCATCACGAGCGCGCGGGTGGGGCGGCTCGCCACCGCCGACGCGGGCGGCCAGCCGATGGTGGTGCCGATCTGCTACGCGTTCGACGGCCGCGCGCTCTATTCCGCCGTGGACGCCAAGCCGAAGCAGGCGCCGCCCGAGGGGCTCAAGCGAATCCGCAACCTCCGGGAGAATCCCCGCGTCTCAATCGTGATCGACCAATATGACGAGGACTGGACGCGTCTGCGCTACGTCATCATCCAGGGACAGGCGGATCTCCTCACGGACGGCCCGCAGTTCGCCCACGGGGTCGATCTGCTCGTCGCCAAGTACGCTCAGTACCGGACCCTCGGTCTGCCGCGTGAGCGCGGCCTCATGATCCGCGTGACGCCCTACCGCGTCTCCTCATGGCAGTACTCGAGCTGA
PROTEIN sequence
Length: 150
MPSSLAAPIPPPVAGFITSARVGRLATADAGGQPMVVPICYAFDGRALYSAVDAKPKQAPPEGLKRIRNLRENPRVSIVIDQYDEDWTRLRYVIIQGQADLLTDGPQFAHGVDLLVAKYAQYRTLGLPRERGLMIRVTPYRVSSWQYSS*