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PLM4_32_b1_sep16_scaffold_9197_4

Organism: PLM4_32_b1_sep16_Rokubacteria_71_14

near complete RP 50 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: 2737..4404

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.7
  • Coverage: 566.0
  • Bit_score: 754
  • Evalue 8.90e-215
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 556.0
  • Bit_score: 746
  • Evalue 2.90e-213
2-isopropylmalate synthase Tax=Frankia sp. EUN1f RepID=D3D042_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 566.0
  • Bit_score: 754
  • Evalue 6.40e-215

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1668
ATGCCGTTCCACCACTACCGTCCGTTCATCCCGATCCCGCTGCCGGATCGCACGTGGCCGTCCCGGGTGATCACCCGCGCGCCCCGCTGGTGCAGCGTGGACCTGCGCGACGGCAACCAGGCCCTGATCGATCCCATGGATCCGGAGCGCAAGCGGCGGATGTTCGACCTGCTGGTGCAGTGCGGCTTCAAGGAGATCGAGGTGGGCTTCCCGGCCGCCTCCCAGCCCGACTTCGACTTCATCCGCCAGCTCGTGGAAGAGGACCTGATCCCGGACGACGTGATCATCCAGGTCCTCACCCAGGCGCGGCCCGAGCAGATCGAGCGCAGCTTCGAGTCGCTGCGCGGCGCCCCGCGGGCGGTGATGCACCTCTACAACTCCACCTCCACGCTCCAGCGCCGGGTGGTCTTCGGCCTCGACCGGGCCGGCATCGTGGACATCGCGGTGCGCGCGGCCCGCCTCTGCCGCGAGCTGGCCGGCACGATCCCCGAGTGCGACGTGCACTACCAGTATTCCCCGGAGAGCTTCACCGGCACCGAGCTCGACTTCGCGGTGGAGATCTGCGAGCGGGTCATGGACGTGTGGGAGCCCACGCCCGCCCGGAAGGTGATCCTGAACCTGCCCGCGACGGTGGAGATGGCCACCCCCAACGTCTACGCCGACCAGATCGAGTGGTTCCTGCGCCACGTGAGCCGGCGGGACTCGCTCGTGCTGTCGCTGCACCCGCACAACGACCGCGGCACCGCGGTGGCCGCCGCCGAGCTGGCCGTCCAGGCGGGGGCCGACCGCGTGGAGGGCACGCTCTTCGGCAACGGCGAGCGCACCGGCAACGTGGACGTGGTCACCCTCGCGCTCAACCTCTTCAGCCAGGGGGTGGACCCGAAGCTCGATTTCGCCGACATCGACGCGGCCCGGCGCATCACCGAGCACTGCAACCGCCTGCCCGTGCACCCGCGGCACCCCTACGTGGGCGACCTGGTCTACACCGCCTTCTCGGGATCGCACCAGGACGCGATCAAGAAGGGCTTCGAGGCCCTCGGCAAGAACTACGACATCTGGGAGGTGCCGTACCTCCCGATCGACCCGCATCACGTGGGCCGGAGCTACGAGGCGGTGATCCGGGTCAACAGCCAGTCCGGCAAGGGCGGCGTGGCCTACATCATGAAGTTCGAGCACGGCTTCGACCTGCCGCGCCGGCTGCAGATCGAGTTCTCGTCCGTGATCCAGAAGATGGTCGAGCAGAGCGGCACCGAGATCAGCGCGGATCAAATCTGGGCCGCCTTCGAGGCGACGTATCTCAAGCCGGACCGACCGCTCTCCCTGGCCCATCATCCGACCGTCACCACCGCGGGGGAATCGGGGGAGACCACCATCGAAGCGCCGCTCCGGGTCGCGGACGTGGAACGGCTCGCGAAGGGGGCGGGCAACGGCCCCATCGCGGCCTTCGTCGACGCCCTCCGCCGCGACGCGGGCATCGCGGTGGCGGTGCTCGACTACCACGAGCACGCGATGGGCGGGGGTGCCGACGCCTCCGCGGTCGCCTACGTCGAGGCGAAGGTGGGAGACGGCAAGGTGCGCTGGGGCGTGGGCATCCACGCCAACATCGTGACCGCCTCGCTCCGCGCGGTGGTCAGCGCGGTCAATCGCGAGGTCGGGCCCGACGTATGA
PROTEIN sequence
Length: 556
MPFHHYRPFIPIPLPDRTWPSRVITRAPRWCSVDLRDGNQALIDPMDPERKRRMFDLLVQCGFKEIEVGFPAASQPDFDFIRQLVEEDLIPDDVIIQVLTQARPEQIERSFESLRGAPRAVMHLYNSTSTLQRRVVFGLDRAGIVDIAVRAARLCRELAGTIPECDVHYQYSPESFTGTELDFAVEICERVMDVWEPTPARKVILNLPATVEMATPNVYADQIEWFLRHVSRRDSLVLSLHPHNDRGTAVAAAELAVQAGADRVEGTLFGNGERTGNVDVVTLALNLFSQGVDPKLDFADIDAARRITEHCNRLPVHPRHPYVGDLVYTAFSGSHQDAIKKGFEALGKNYDIWEVPYLPIDPHHVGRSYEAVIRVNSQSGKGGVAYIMKFEHGFDLPRRLQIEFSSVIQKMVEQSGTEISADQIWAAFEATYLKPDRPLSLAHHPTVTTAGESGETTIEAPLRVADVERLAKGAGNGPIAAFVDALRRDAGIAVAVLDYHEHAMGGGADASAVAYVEAKVGDGKVRWGVGIHANIVTASLRAVVSAVNREVGPDV*