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PLM4_32_b1_sep16_scaffold_1051_1

Organism: PLM4_32_b1_sep16_Gemmatimonadetes_67_8

near complete RP 42 / 55 BSCG 41 / 51 ASCG 11 / 38
Location: comp(1..225)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 76.0
  • Bit_score: 84
  • Evalue 2.90e-14
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 75.0
  • Bit_score: 88
  • Evalue 5.80e-16
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 72.0
  • Bit_score: 104
  • Evalue 6.60e-20

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 225
ATGGACGATCTTGAGCGTCTCTACACGACTCACTACGCGGCGGTGGTCCGTTTCCTGTATCGGAAGATCTGGGACGCGGACCGCGCCGAAGATCTTGCCCAGGAAGTGTTCATCCGCGCCATGGCCCACCGGCCCGAGAAGCCCCGGGCGTGGATATTTGCGGTGGCGGCCAATCTGGCCAGGGATGAGGCGCGCGCCGCGATTCGGCGCAAGAAGCACCTCACT
PROTEIN sequence
Length: 75
MDDLERLYTTHYAAVVRFLYRKIWDADRAEDLAQEVFIRAMAHRPEKPRAWIFAVAANLARDEARAAIRRKKHLT