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PLM4_32_b1_sep16_scaffold_16580_4

Organism: PLM4_32_b1_sep16_Chitinimonas_koreensis_64_14

near complete RP 43 / 55 MC: 2 BSCG 42 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 3811..4794

Top 3 Functional Annotations

Value Algorithm Source
CadR Tax=Pseudomonas putida RepID=H9A573_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 317.0
  • Bit_score: 271
  • Evalue 7.40e-70
Transcriptional regulatory protein {ECO:0000313|EMBL:BAR59769.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 309.0
  • Bit_score: 276
  • Evalue 4.20e-71
bacterial regulatory helix-turn-helix , lysR family protein similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 314.0
  • Bit_score: 274
  • Evalue 3.20e-71

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Taxonomy

Bradyrhizobium diazoefficiens → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 984
ATGTCCAAGACACGCAACCGGGAGAGTCTCATCGGACGCCGCCTCCGATTGAAGGACCTGCACGTGTTCATGGCTGTCGTTCGGTCCGGAAGCATGGCGAAGGCGGTCGATTTGCTCGGTATATCTCAGCCGGCGATCTCCGAGGTCATTGCAGGTCTGGAGCACGCGTTGCGCGTCAAGTTATTCGATCGAAACCCGCGAGGGGTTGAATTGACGCCCTACGGTCGCGCCTTGCTCAAACGCGGAATCGCCGCGTTCGATGAACTGACTCAAGGCTTGGTTGAGATTGAGGAACTAGCCGATCCCGAAGCCGGGGAAGTACGGATCGGCTGTCCGGAGTCGATTTCCGCTGCGTTCATGCCCGCGATCGTCCGGCAATTCAAGCAAAAGTACCCGCGCGTGGTGCTGCAGTTGGATAACGTTTCCACCCCTACGATGGAATTGCCTCAGCTTCGGGATCGCAGTCTCGATTTGGTCATCGCGCGAATACTGCAGCCCGTTGCCACAGATATTTTCGCAGATGATCTCAATGTGGAAATCCTCTTCGAGGATCACGTCGTGATCGCCGCAGGACTGCAGTCTCGCTGGGCTCGGCGCCGCCGCATCGACCTTGCCGAACTGGTTGACGAGCCCTGGATCGTGACGAACTCCCGTGCCGGGTCCATTGTCGCGGAGGCCTGCCGGACCAAGGGGTTGAAGGAACCGAACGTCAGCTTGGTCACGTATTCCGTTCACCTTCGTACGAATTTGGCGGCCACTGGGGATTATTTGAACGCTCTTCCCGCATCGGTGCTGCGCTTCAATGCGGAGCGGTTCGCGCTCAAGGTACTGCCGGTGGAACTGCCATTGCGGCCCTGGCCCGTCGCGTTGGTCACGCTGAAAAACCGTGTGCTGAACCCGGTCGTGCAGCGCTTCATCGATCACGTCAGGACGTTTACAAAATCCATGGCAGGTCCTTCGACCCGAGCAAAAAGTCCTGACTAG
PROTEIN sequence
Length: 328
MSKTRNRESLIGRRLRLKDLHVFMAVVRSGSMAKAVDLLGISQPAISEVIAGLEHALRVKLFDRNPRGVELTPYGRALLKRGIAAFDELTQGLVEIEELADPEAGEVRIGCPESISAAFMPAIVRQFKQKYPRVVLQLDNVSTPTMELPQLRDRSLDLVIARILQPVATDIFADDLNVEILFEDHVVIAAGLQSRWARRRRIDLAELVDEPWIVTNSRAGSIVAEACRTKGLKEPNVSLVTYSVHLRTNLAATGDYLNALPASVLRFNAERFALKVLPVELPLRPWPVALVTLKNRVLNPVVQRFIDHVRTFTKSMAGPSTRAKSPD*