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PLM4_65_coex_sep16_scaffold_39163_1

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_54_17

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 1..1104

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor plug Tax=Geobacter metallireducens RCH3 RepID=H1L2U7_GEOME similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 386.0
  • Bit_score: 302
  • Evalue 4.40e-79
ligand-gated channel similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 390.0
  • Bit_score: 317
  • Evalue 4.90e-84
Ligand-gated channel {ECO:0000313|EMBL:AJE03868.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 390.0
  • Bit_score: 317
  • Evalue 2.40e-83

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Taxonomy

Geobacter pickeringii → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1104
GGGGGGCCGGGCCTGTTCAATGAATTTTCCATTCAAGGCGCCAATGTTCTTCATATCCTGGTCATCCTGGACGGGGTCACCTTGAACTTAATGGGTATCCCTTTCGTCGATATTTCCGGGTTCCCTCTCCAGAACATTGAAAGGGTCGAGATTATCAAGGGGCCCGGTTCCTCGTCCTGGGGTTCTGCCCTCGGCGCAGTCGTCAACATAGTCACAAAGTCCCCCCAAGAGGGGAAAAAAGTTGGAGGGACACTCTCCTTCTCCGGCGGTGAAAGAGGGACCAGGGACACCCGTGGAGAGGTATCGGGAACAATCGGCCCGCTCGGCTACTATCTCTATTCCGGAAACCTCAGATCCGATGGATTCCGTCCCAACAGCTCAGTCGACCAGAACGATATTTACGCCAAGCTCCGCTGGGATCTCCCGGAGCATGGGTCCCTGCAGTTCTCCATCGCTTACGACCGGGGAAGCGTCGGAGAAGGTGACGATCCGGCACAATTGTGGAGATTTCACAGACGCTCTTTCCTCTCCACCCTCGCCTTCAACTATCCTGTAACAAACAAAATCGACATCGATCTCTCCCTGCGCACCACATACAAAAAAGTCCACGAGTTCGCGTTCACCGGCGACCCGGATGAAGGAAAAATCCACGAGACAAGCGACGGGGGGAGCGCCAAGCTGACCTGGCGGGAAGGGATAAACACCCTTGCCGTGGGCGTAGATTATGACCATCTGGACATCAAGGACTATTCCTTTCATCTTTTAAGCGACAAATACGGGATCTTCCTGAACGACACCCTGGCCATCCGCAATCTCAGCATCACCCCCGGAATCCGCTACGACAAGATGAGACCGGTGGGTGACTTCTTCAGCCCGAGTCTGGGTGTCGCCTGGAACCCTACGGATAAGCTTACCCTGCGCGCCTACGGGGCCCACGGCTACAGCCTCCCTATCATCTGTCCGGTTCGCAATCCCTTACCCAGGCAGCAACAGGTAACGACCTTCCAGGTAGGGGTGGAGACGACCCATATCCCCTGGCTCTGGCTCAAGACCACTTTTTTCCGGAATCAGCTCTCGGACATCCAGGAACGAGTGGCTGGTTGA
PROTEIN sequence
Length: 368
GGPGLFNEFSIQGANVLHILVILDGVTLNLMGIPFVDISGFPLQNIERVEIIKGPGSSSWGSALGAVVNIVTKSPQEGKKVGGTLSFSGGERGTRDTRGEVSGTIGPLGYYLYSGNLRSDGFRPNSSVDQNDIYAKLRWDLPEHGSLQFSIAYDRGSVGEGDDPAQLWRFHRRSFLSTLAFNYPVTNKIDIDLSLRTTYKKVHEFAFTGDPDEGKIHETSDGGSAKLTWREGINTLAVGVDYDHLDIKDYSFHLLSDKYGIFLNDTLAIRNLSITPGIRYDKMRPVGDFFSPSLGVAWNPTDKLTLRAYGAHGYSLPIICPVRNPLPRQQQVTTFQVGVETTHIPWLWLKTTFFRNQLSDIQERVAG*