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PLM4_65_coex_sep16_scaffold_2675_2

Organism: PLM4_65_coex_sep16_Rokubacteria_70_16

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 8 / 38
Location: comp(2119..3237)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWA2_Methylomirabilis_73_35 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 344.0
  • Bit_score: 403
  • Evalue 1.90e-109
putative RNA polymerase sigma factor containing a TPR repeat domain similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 362.0
  • Bit_score: 380
  • Evalue 3.60e-103
Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 344.0
  • Bit_score: 403
  • Evalue 2.60e-109

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1119
GTGGGCACCCCCGAGGCGCAGCGCGCGGTCGAGGCGGTCGTACGAAACTCGTACGGCCGCCTCGTCTCCTTCCTGGCCGCCCGCTCGCGTGACGTGGCCGGCGCCGAGGATGCGCTGGGCGAGGCGTTCCGCGCCGCGCTCGAGACCTGGCCCGACGAGCTGGCCGAGGTCACGGCGGCCACCGAGATCCCGGACGACCGGCTCCGGCTCCTGTTCGTGTGCGCGCATCCGGCCATTGGCGCCGACGTGCACACGCCGCTCATGCTCCAGACCGTGCTCGGTCTCGACGCGGCCCGGATCGCCTCCGCCTTCTGCGTGGCGCCGGCGACGATGGGCCAGCGCCTGGCGCGGGCGAAGGCGAAGATCCGCCTGGCCGGCATCCCGTTCACGGTGCCGGAGACGCGCGAGTTGCCGGCGCGGCTGGACGCCGTGCTGCAGGCAATCTACGCAGCCTACGGCGCCGGCTGGGACGACGTGGCTGGCGCCGATCCGCGCCGGCGCGGGCTGGCCGAGGAGGCGATCTGGCTGGCGCGCCTCGTCGTCCGCTTGCTCCCCGATGAGCCCGAGGCGCGCGGGCTGCTGGCGCTCATGCTGCACTGCGAGGCCCGCCGCGCGGCCCGGCGCGGACCCGACGGCGAGTACGTCCCGCTCTCCGAGCAGGACATCGCGCTGTGGTCGTCGTCGCTGATCAACGAAGCCGAGCTGGCGCTGAGCGCGGCGGCGACACAAAACACTCCCGGCCGGTTCCAGCTCGAAGCCGCGATCCAGTCGGTCCACGCGCACCGCGCGGTGACGGGACGGACGGACTGGGAAGCGATCGCCCTGCTCTACGAGGGGCTCGTGGGGGACACGCCGACGCTCGGTGCGCTGGTCGGGCGGGCGGCGGCGCTCGGCAACGCCCGGGGTGCGACCGCCGGTCTGGCCGCGCTGGAGGCGATCGCGCCGGCCGCGGTCGCCGCCTACCAGCCCTACTGGGCGGTACGCGCTCACCTGCTCGCCGAGGCGGGACACGCGGATGCGGCGGGCGAGGCCTACGCGCGGGCGGGCGGGCTCAGCGAGGTGCCGGAGGTGCGCGCGTTCCTGCTCAGTCGCCGGACAGCTCGACGAACTTCTTCGTGA
PROTEIN sequence
Length: 373
VGTPEAQRAVEAVVRNSYGRLVSFLAARSRDVAGAEDALGEAFRAALETWPDELAEVTAATEIPDDRLRLLFVCAHPAIGADVHTPLMLQTVLGLDAARIASAFCVAPATMGQRLARAKAKIRLAGIPFTVPETRELPARLDAVLQAIYAAYGAGWDDVAGADPRRRGLAEEAIWLARLVVRLLPDEPEARGLLALMLHCEARRAARRGPDGEYVPLSEQDIALWSSSLINEAELALSAAATQNTPGRFQLEAAIQSVHAHRAVTGRTDWEAIALLYEGLVGDTPTLGALVGRAAALGNARGATAGLAALEAIAPAAVAAYQPYWAVRAHLLAEAGHADAAGEAYARAGGLSEVPEVRAFLLSRRTARRTSS*