ggKbase home page

PLM4_65_coex_sep16_scaffold_1469_10

Organism: PLM4_65_coex_sep16_Methylomirabilis_oxyfera_66_7

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 ASCG 10 / 38 MC: 1
Location: 6046..7638

Top 3 Functional Annotations

Value Algorithm Source
Putative general secretion pathway protein D Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7C5_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 371.0
  • Bit_score: 208
  • Evalue 1.60e-50
type II and III secretion system protein similarity KEGG
DB: KEGG
  • Identity: 35.2
  • Coverage: 401.0
  • Bit_score: 209
  • Evalue 1.20e-51
Type II and III secretion system protein {ECO:0000313|EMBL:AHG91941.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.2
  • Coverage: 401.0
  • Bit_score: 209
  • Evalue 6.00e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1593
ATGGAAGTAAGTCGGTCGGTCAGTAAGTCAGTTGGTCGGTCAGTTGGTCGGTCAGTCGGTCGGTCTGTCGGTCGGTCTGTCGGTCGGTCGGGCGGTGGGTGGGACCGAGAACCTGACCGCCCGTCCGTCCGTCCGACCGACCGACCCGGGATCGTATCCCTTGCATTGCTCTGCCTGAGCCTCGCAGGCCCCGCCTCGGCCCAGGACTCCCTCCCGGTCCGCGAGCGCCAGGACAGCGTCTCGATCCGCTTTGTGGATACCGACCTCCGGGCTGTGGTGCAGGCACTCGGCCGCTACCTGCCCAAGCCTGTGGTTGTGGCGGGGTTGCCGGGGAATCGGGTCTCGCTGGAGACCCAGGGGCTGGTCTCCCGGGCGACGGTCGCGACGCTGCTACGAGGTCTGATCGAGTCACAGAGCCTGCTCTTCCAGGAAGACTCGGCGTTCATCCGGATCGGGCCGAAACCGGACGGTCAGTCGGTCGGTCGGTCGGTCGGCCAGCCGGATACAGCTCTGATGCAGCTGTTTGTGGTTCGCCTCAAGCATGCCCGGGCCGCGGACGTAGCCGCGACAGTGAACATGCTTTTCGGAGGAGGCGGGGAGTTCTCGGGCCGGAGTGGCTTGGGGACGGGTACTCTCTCTGACGAGCTCCGTCGCCAGGTGCAGCCTCCAACCGGCGGACCGACCGACCGACCGACCGACCGACCCACAGACCGCACCGCCTCCCTCTCCGGCCCCGTCACCATCGTCCCCGATGAACTCACCAATTCGCTCCTGATGCGCGCGACCGTGCGCGACCGTGACGTGATCAAGGCCGCGGTGGAGCAGCTCGACATCCGCCCACTGCAGGTAATGATCGAGGTCCTGATCGTCGAAGCGCGGCGCAGCAAGGACTTCTCGGTGGGGACCAGCCTGTTCCTGCCACCGCAGCACATCAAGGGAGACGCCGACGGGACCATCGGTGGGCAGACCCAGGGTGCCGGCCTGGGAGATCTGGTGCTCCGGCTCCTGAACCTCGGCCGGGCCGACATCGACGCCACCATCAGTGCCTCGGAAAGCCAGGGCAACGTCAAGATTGTCTCCCGGCCGGTGCTTCTCGCCTCCAACAACACCGAGGCCAGCTTCCTGGTGGGGAGCCAGCGGCCATTCGTGCAGGTGAGCCGCCTCCTTCCCACCGACAACAACAACCAGGACCGGGTAGTGCAGTACCGCGATGTCGGCACCCGGCTTCGGGTGCGGCCGACGATCAACCAGGACGGGTACGTCTCGCTGGTCATTCAGCAGGAGATCAACGCCGCCACGAATGAAGTCGCGTTCGACGCGCCGGTGATCTCCACCCGCGAGGCCCAGACGCAGGTCCTGGTGCGGGACGGACAGACCATCATGCTGGGTGGACTGCAGGACCAGCAGCGGGACCGGACGCGGTCTGGTGTGCCACTGCTTTCCGGTCTGCCCCTCATCGGCCCGCTCTTTGGAGCGACGAGTCACAACGACAGCCAGACGGAACTGTATCTGTTCATTACTCCGCGGATCCTTCGAACCGATGAGGATGCGGACCGGGTAACTCAGCCGCACTTGCCGGAGGGGGCGAAATGA
PROTEIN sequence
Length: 531
MEVSRSVSKSVGRSVGRSVGRSVGRSVGRSGGGWDREPDRPSVRPTDRPGIVSLALLCLSLAGPASAQDSLPVRERQDSVSIRFVDTDLRAVVQALGRYLPKPVVVAGLPGNRVSLETQGLVSRATVATLLRGLIESQSLLFQEDSAFIRIGPKPDGQSVGRSVGQPDTALMQLFVVRLKHARAADVAATVNMLFGGGGEFSGRSGLGTGTLSDELRRQVQPPTGGPTDRPTDRPTDRTASLSGPVTIVPDELTNSLLMRATVRDRDVIKAAVEQLDIRPLQVMIEVLIVEARRSKDFSVGTSLFLPPQHIKGDADGTIGGQTQGAGLGDLVLRLLNLGRADIDATISASESQGNVKIVSRPVLLASNNTEASFLVGSQRPFVQVSRLLPTDNNNQDRVVQYRDVGTRLRVRPTINQDGYVSLVIQQEINAATNEVAFDAPVISTREAQTQVLVRDGQTIMLGGLQDQQRDRTRSGVPLLSGLPLIGPLFGATSHNDSQTELYLFITPRILRTDEDADRVTQPHLPEGAK*