ggKbase home page

PLM4_65_coex_sep16_scaffold_14947_1

Organism: PLM4_65_coex_sep16_Methylomirabilis_oxyfera_66_7

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 ASCG 10 / 38 MC: 1
Location: comp(3..848)

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain protein TIM barrel Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCB2_THET1 similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 280.0
  • Bit_score: 251
  • Evalue 6.80e-64
xylose isomerase similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 280.0
  • Bit_score: 251
  • Evalue 1.90e-64
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 281.0
  • Bit_score: 451
  • Evalue 4.80e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_NC10_66_22 → NC10 → Bacteria

Sequences

DNA sequence
Length: 846
ATGATTCGTGTGGCCACAGCTCCGATGAACTGGAACAGCGACGACCTGCCCGATCTGCGCCCGCTGATCCCGATGGAACAGGTGTTGCGGGAAATGGTCGAGGCGGGATACGAGGGGACGGAATACGGGACGGGCCTGCCGGCTGACCCCAAAGCCCTCCGCACCATGCTGGCGCCCCACGGACTCACCCTGGCCTCCATGTTTTGCTGGGTCAGCCTGGAGGATCCGGACAGGCAGCCGGAGGAGCTCCAGCGGGCGCTGGAGGTCGCACGGACCCTGGGGTCCATGGAGGTGCGCGAGCTGATCCTGGGGATGCGCGGGAGCTCCCAGCGGATCAAGCTAGCGGGCCGCGTGCCTCGCGACGGGAGCGCCGGCCTGACGGATACGCAATGGCACGTCCTGGCCGACGGGGTCCACGCTCTGGCCAAGGCGTGTGAGCCGCTCGGTGTCCGGCTGGCGGTCCATCCCCATGCGGGCTCGTATGTGGAGACGCGGGACGAGCTGGAGACGCTCTTCAGCAGGACCGATCCCAGGGCGCTCGGCCTGTGTGTGGATGCGGGGCACCTGGTGTACGGCGGCGCCGATCCGGTGGAGGTGGTAGAGACCTACGGCCCGCGGGTGTGGTATGTCCACATCAAGGACGTGAACCCCACGGTTCTGCACCTGTCGATGCAGAACGGCCTCGGTTTCCTGGGTGCCTTACGATCCTACATCTTCTGCGGGCTGGGAAGAGGGTGCGTGGACCTCCGCCGGTTCATGAATGCGCTGCGGAAGGTGAGCTTCTCCGGCTGGATGGTCATCGAGGAGGACACATCGCCGCGATCTCCGCTGGAGGCTGCGAGGGCG
PROTEIN sequence
Length: 282
MIRVATAPMNWNSDDLPDLRPLIPMEQVLREMVEAGYEGTEYGTGLPADPKALRTMLAPHGLTLASMFCWVSLEDPDRQPEELQRALEVARTLGSMEVRELILGMRGSSQRIKLAGRVPRDGSAGLTDTQWHVLADGVHALAKACEPLGVRLAVHPHAGSYVETRDELETLFSRTDPRALGLCVDAGHLVYGGADPVEVVETYGPRVWYVHIKDVNPTVLHLSMQNGLGFLGALRSYIFCGLGRGCVDLRRFMNALRKVSFSGWMVIEEDTSPRSPLEAARA