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PLM4_65_coex_sep16_scaffold_38175_3

Organism: PLM4_65_coex_sep16_Methylomirabilis_oxyfera_66_7

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 ASCG 10 / 38 MC: 1
Location: comp(1209..1811)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LU56_HALO1 similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 201.0
  • Bit_score: 172
  • Evalue 3.70e-40
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 201.0
  • Bit_score: 172
  • Evalue 1.10e-40
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 200.0
  • Bit_score: 327
  • Evalue 1.30e-86

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Taxonomy

R_NC10_66_22 → NC10 → Bacteria

Sequences

DNA sequence
Length: 603
ATGGGAGGTCCTGGGGGGCCGGCAGAGGAGCCGCAAGCCGATCGGGACCTGGTGGAGCGGGCGAGACAGGGGGACCGGGAGGCCTTCGGAACCTTGGTCCGGCGCCACCAGGGTCGGGCATTCAACCTCGCGTACCAGATGGTCCGCAACCGCGAGGATGCCCTCGACATCTCGCAGGAGGCCTTCGCCAGAGCCTACACCTCCCTGGCATCGTTCAAGGGCGAGGCGAGCTTCACCACCTGGCTCCACCGCATTGTGGTCAACCTGGCCATCGACAACCTCCGTCGAACGCGACGGAGCGGCACGACAGCCTACAACGATACGCGGGCTCTGCCCGAGGAACAGGAGGCCGAGCCCTCCGCCCCCGACGATCCCGCCGTGGCCCTGGAGAACAAGCAGGTCCGCGTGCTGCTCGCCAGCGGGATCGCAAAGCTCCCACCTGCGCAACGGGCGGTCCTTGTCCTCAGGGAGATCGAGGGGATGAGCTACGAGGAGATTTCCCGAGCGGTGGGATGCAACCTCGGGACGGTGATGTCCCGGCTGTTTTACGCCCGGCGGAGGCTGCAACAGGTGCTGAGGTCGCGCCTGGGCGACCTCCGGTGA
PROTEIN sequence
Length: 201
MGGPGGPAEEPQADRDLVERARQGDREAFGTLVRRHQGRAFNLAYQMVRNREDALDISQEAFARAYTSLASFKGEASFTTWLHRIVVNLAIDNLRRTRRSGTTAYNDTRALPEEQEAEPSAPDDPAVALENKQVRVLLASGIAKLPPAQRAVLVLREIEGMSYEEISRAVGCNLGTVMSRLFYARRRLQQVLRSRLGDLR*