ggKbase home page

PLM4_65_coex_sep16_scaffold_53930_1

Organism: PLM4_65_coex_sep16_Methylomirabilis_oxyfera_66_7

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 ASCG 10 / 38 MC: 1
Location: 104..1303

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system F domain protein bin=GWC2_Nitrospirae-rel_56_14 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 399.0
  • Bit_score: 352
  • Evalue 5.20e-94
type ii secretion system protein similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 405.0
  • Bit_score: 298
  • Evalue 2.50e-78
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 398.0
  • Bit_score: 375
  • Evalue 8.10e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Nitrospirae_42_15_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1200
ATGGCGACGTTTAGTTACCGGGCGCGGGATGCCTCAGGGGTGCTCATCACCGGCCATATGGAAGCCGAGGCGCAGCAGTCGGTGGCCCAGCGGCTCCTGCAGACGGGCTACGTGCCCACGCTCATCAAGCCGGCCTGGGACCTCCCCAGCCTGACCAAACTCTCCGCCCCGTTCAGGCGGGTGCGGGCCGATGATCTGATCCTCTTCACGCGGCAGTTGGAGGTCCTGTCGCGGGCCGGGATCCCGCTCCTCGAGAGCCTGGAGACCCTGGCCAAGCAGGCACGGACCCGAATCTTCCAGCAGGTGATCCTGGGGGTGGCCCGGGATATCGAATCGGGCTCCACCCTCTCCGACGCCATGGGCAGATACCCGCAGGTTTTCCCTGAGATATATGTCAGCACCATCCGGGCGGGGGAAATGGGGGGATTCCTTGATCTCGTGCTGGAGAGGCTCGCCGTGCTAGGCGAACATGAGGCCGAGACTCAGGCCCGGATCAAGGCGGCGGTCCGCTATCCCATCTTCGTCGTGACGGCTATCGGGATCGCCCTCGTCATCATCGTCACCTTCGTGGTTCCGAAGTTCGCCCTCCTGTACGGGGCCTTCCGGGCCACCCTGCCCCTGCCGACCCGGATCGCCTTCGCCGTGGGCCTGGCCCTCCAGCGATTCTGGTACCTGGCCGTCACCGGGGCCGCGGCGGGCGTGGGCGCCCTCTGGCTGGCCCTGAGGGTCCCGCGGATCCGGTTGTGGTGGGACGGGGCCAAGCTCCGGCTCCCCGTCCTCGGGCCCGTCATCCTGAAGCTCAGCCTGTCCCGCTGGGCCCACATCCTGAGCCTCCTCGTGCGGAGTGGGGTGCCCATCCTGAAGAGCCTCGAGGTGGTGGCGCGGGCCGTCGGCAATGCCGCCCTGAGTCGGTCGGTTCTGGCCGTGGCCGACGCCGTGGAACGGGGACAGGCCCTGGCGGAGCCTATGGCGCGCGACCCCCTCTTCCCTCCCCTCGTCGTGCAGATGGTCGCGGTGGGCGAGCGGACGGGGGAACTGGAGGCGCTCCTGTTGAAGGTCTCGGAACACTACGATCGGGAGGCGGACTACGCCATCCGGAATCTCAGCACAGCCCTGGAGCCGATCCTGTTGGTCATCATCGGGGGCTTGGTTTTCTTCCTGGCCTTGGCCGTGTTCTTGCCCAGGACATGGTACGGCTGA
PROTEIN sequence
Length: 400
MATFSYRARDASGVLITGHMEAEAQQSVAQRLLQTGYVPTLIKPAWDLPSLTKLSAPFRRVRADDLILFTRQLEVLSRAGIPLLESLETLAKQARTRIFQQVILGVARDIESGSTLSDAMGRYPQVFPEIYVSTIRAGEMGGFLDLVLERLAVLGEHEAETQARIKAAVRYPIFVVTAIGIALVIIVTFVVPKFALLYGAFRATLPLPTRIAFAVGLALQRFWYLAVTGAAAGVGALWLALRVPRIRLWWDGAKLRLPVLGPVILKLSLSRWAHILSLLVRSGVPILKSLEVVARAVGNAALSRSVLAVADAVERGQALAEPMARDPLFPPLVVQMVAVGERTGELEALLLKVSEHYDREADYAIRNLSTALEPILLVIIGGLVFFLALAVFLPRTWYG*