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PLM4_65_coex_sep16_scaffold_85403_2

Organism: PLM4_65_coex_sep16_Methylomirabilis_oxyfera_66_7

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 ASCG 10 / 38 MC: 1
Location: comp(650..2098)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 473.0
  • Bit_score: 701
  • Evalue 4.60e-199
Transcription-repair-coupling factor Tax=uncultured Desulfobacterium sp. RepID=E1YBQ9_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 473.0
  • Bit_score: 662
  • Evalue 2.90e-187
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 473.0
  • Bit_score: 620
  • Evalue 3.50e-175

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Taxonomy

Spirochaeta sp. JC202 → Spirochaeta → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 1449
CGCCTGGCCGTGCTGAGCGATGAGGAGATTTTCGGTGTCCGGCACCTGCGCCGGACCCAGCCCGCCGCGAAGGCCCGCTCCCAGCTTCTGAACCTGCAGGAGCTAAAACAGGGCGACCTGATCGTGCACGACGAGCACGGCATCGGCCAGTACGATGGGCTTCAGAAGCTGACGGTCGAAGGGGTTCGGAACGACTTCCTCGTCCTGCGCTATCACGGCGGCGACACGCTCTACCTGCCGGTGGACCGTATGGGCATGGTTCAGAAATACATGGGAGTCGAAGGGCACGGGCCGCCGCTGGACAAGCTGGGGGGCAAGTCCTGGGAGCGGGTGAAGGCCCGCGTCAAACGCTCCGCGGAGAAGATCGCCGGCGAGCTTCTCCGGCTCTACGCCCAGCGCAAGGTGGCCGGCGGTTTCGCGTTTCCCGCCGCGGACGGTTATTTCCGGGATTTTGAGACCGGCTTCGCCTACGAAGAAACGCCGGACCAGCTCAAGGCGATCGACGACGTCCTGGCCGACATGCAGCAGACCGTCCCCATGGACCGCCTCGTGTGCGGCGACGTCGGCTACGGCAAGACCGAGGTGGCGCTGAGGGCCTCCTTCCTGGCGGCCTGCAGCGGCAAGCAGGCGGCGATTCTGGTTCCGACCACGATCCTCGCGGAGCAGCACTACGCCACCTTCCGCAGCCGGTTCCAGCGCTACCCGGTGAACGTCGCCTGCCTGAGCCGCTTTCGGTCCCGCCCGGAGCAGCAGGCCATCCTCGCGGGCTTGAAATCCGGCGCGATCGACATCGTCATCGGGACCCACCGGCTGATTCAGAAGGATGTCGCGTTCAAGGACCTGGGGTTGCTCGTGCTCGACGAGGAACAGCGCTTCGGGGTCCGGCACAAGGAAAAGATCAAGAGCCTGCGCGCCTCGGTCGATGTGCTCGCCCTGACCGCGACACCGATTCCGAGGACGCTGCACCTGTCGCTCGCGGGGGTCCGGGACATCAGCTTGATCCAGACCCCGCCCGAATACCGCAAGTCGATCATCACCTACATCTGCGAGTTCGACCCGAATGTGGTGGCCGAGGCCATCCGCCGCGAGCTGCGGCGGCAGGGCCAGATCTTCTTCGTCCACAACAACATTCACAGCATCCACGCGATGGCCGGCAAGCTCAAGGAGCTGGTCCCCGAGGTCAGGCTCGATGTGGCCCACGGCCGCATGGCGGAAGACGAGCTGGAGCGGGTCATGGTCCGCTTTCTGAATCGGGACATCGACATGCTGGTGTGCACCACCATCATCGAGTCCGGCCTCGACATCCCCTCGGCCAACACGATGATCGTCGACCGGGCGGACTGCTTCGGGCTGTCCCAGATGTACCAGCTGCGGGGCCGGGTGGGCCGGGCGGACGAGCAGGCCTATGCCTACCTGCTCATCTGGGGGCCGGTTTCCAGATTGCCATGA
PROTEIN sequence
Length: 483
RLAVLSDEEIFGVRHLRRTQPAAKARSQLLNLQELKQGDLIVHDEHGIGQYDGLQKLTVEGVRNDFLVLRYHGGDTLYLPVDRMGMVQKYMGVEGHGPPLDKLGGKSWERVKARVKRSAEKIAGELLRLYAQRKVAGGFAFPAADGYFRDFETGFAYEETPDQLKAIDDVLADMQQTVPMDRLVCGDVGYGKTEVALRASFLAACSGKQAAILVPTTILAEQHYATFRSRFQRYPVNVACLSRFRSRPEQQAILAGLKSGAIDIVIGTHRLIQKDVAFKDLGLLVLDEEQRFGVRHKEKIKSLRASVDVLALTATPIPRTLHLSLAGVRDISLIQTPPEYRKSIITYICEFDPNVVAEAIRRELRRQGQIFFVHNNIHSIHAMAGKLKELVPEVRLDVAHGRMAEDELERVMVRFLNRDIDMLVCTTIIESGLDIPSANTMIVDRADCFGLSQMYQLRGRVGRADEQAYAYLLIWGPVSRLP*