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PLM4_65_coex_sep16_scaffold_113291_3

Organism: PLM4_65_coex_sep16_Methylomirabilis_oxyfera_66_7

near complete RP 40 / 55 MC: 2 BSCG 41 / 51 ASCG 10 / 38 MC: 1
Location: comp(2134..2673)

Top 3 Functional Annotations

Value Algorithm Source
Putative Efflux transporter, RND family, MFP subunit bin=GWA2_Methylomirabilis_73_35 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 176.0
  • Bit_score: 103
  • Evalue 1.90e-19
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 190.0
  • Bit_score: 95
  • Evalue 1.50e-17
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 165.0
  • Bit_score: 118
  • Evalue 6.10e-24

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 540
AACGCCGCCCTGCGGTTCAAGCCGAACGGCGAAGACACCAAGAGCACCGGGGAATCCCGCAGCGCCTCGGCTTCTTCCGGCGAAACGGCCCAGCCGGAAGTGCGCTTGAAGCAGCTGGCCGCAGCGCTTCGTCTCACCGAATCCCAGCAGAACCAGGTACGGGTCATCCTCACCGACGCTCGTGAGAAACTCGAAGCCCTGCGCCGACAGGATGCCACCCCCGATGAGATCCGGCGGGAGACCCAGGCTCAGCGCGAGCGCACCCGGAACATCGTTGCCACCCTGCTCTCCTCTGAGCAGCGGGAGAAATACATCCGTTTCGCGGCCGCCCAGGAAGGCGTCTCCCCCATCCGGGGAAAGGTCTACGTCGCCGGAGAAAAGGACAAACCGCAACCGGTTGACCTGGTCCTGGGCATCAGCGACGGCACCTTCACCGAAATGGTGAGCGGCGACCTCAACACCGGCCAGCAGGTCATCATCGGCGTGAACCTGACCGCCTCCAAAAACTCCACGCGTGCAGCGAAGCGTTTCGCCTTCTAG
PROTEIN sequence
Length: 180
NAALRFKPNGEDTKSTGESRSASASSGETAQPEVRLKQLAAALRLTESQQNQVRVILTDAREKLEALRRQDATPDEIRRETQAQRERTRNIVATLLSSEQREKYIRFAAAQEGVSPIRGKVYVAGEKDKPQPVDLVLGISDGTFTEMVSGDLNTGQQVIIGVNLTASKNSTRAAKRFAF*