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PLM4_65_coex_sep16_scaffold_293_19

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(24103..25542)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma-54 specific, transcriptional regulator, Fis family bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 460.0
  • Bit_score: 562
  • Evalue 2.40e-157
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 469.0
  • Bit_score: 561
  • Evalue 1.90e-157
Tax=GWA2_Deltaproteobacteria_54_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 465.0
  • Bit_score: 571
  • Evalue 7.10e-160

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Taxonomy

GWA2_Deltaproteobacteria_54_12_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1440
ATGGATCATAAAAATCACGCTAAAAATTTCGCCTCTTCAGTAATCGTTCTGGTGGACGATGAACCGGAAATCCTGTTCAGTTCCGCCGCGATCTTGCGCAGGGCAGGACTGGAAAATCTGCATACGCTTGAGGATAACCGCAAACTCCTTCCTCTCCTTGCCGAACAAGAGGTGGCGGTAATCGTCCTGGATCTGTGGATGCCCCATGTTTCCGGGCAGGAGCTGCTCGAGGAAGTTGTTTCCAATTATCCCCAGGTGCCGGTTATCGTCATGACCGCGGCAAGCGAGATTGAAACCGCCGTGGCGTGCATGAAGGCCGGCGCCTTTGATTACCTGGTGAAACCGGTTGAGGTGAGCCGTTTCATCTCCTGCATCAGAAGGGCACTGGAAATGAACTCCCTGCGCCGCGAAAATTCGTCGTTGCGGGAGACTCTGCTGACGGGACGACTGAAGCATGAAGACGTGTTCTCCTGCTTTATCACGCAGGAGAGCAGAATGAAGGCGATCTTCGGTTATCTGGATGCGGTGGCGGAGACGGGCCAGCCGGTTCTCATCACCGGCGAAACCGGGGTTGGAAAGGAGAGGCTGGTCAGGGCGCTGCATAGACTGAGCGGCCGAACGGGCGACCTTGTTGCCGTGAATGTGGCCGGCCTCGATGACATGATGTTTTCCGATACCCTTTTCGGTCACAAGAAGGGGGCATACACGGGGGCTGAGCAGGCGCGGGAAGGGATGATCGCCAAGGCGGCAGGCGGGACCCTCTTCCTCGATGAAATCGGTGATCTGAACCTGACATCGCAGGTGAAGCTGCTCCGCCTTTTGCAAGAGGGGGAATACTATCCTCTAGGGTCGGATGTCATCAGGCGGAGCGACGCCCGGATCGTCGTGGCCACCAATCAGAATCTCCGCCATTTCATGGCGGAGGGGAAATTCAGGAAGGATCTGTACTATCGCCTGAGCGCCCACCAGGTAAATGTGCCGCCGTTGCGCGAACGAAAGGAGGATATTCCGCTGCTGCTCGACCATTTCCTTGCCGAAGCAGCAACCACCTTCAACAAGAAAAAGCCGACACTCCCACCTGAACTGGTCAGCTATCTTTCGGTCTACCATTTTCCCGGAAACATCCGAGAACTCAGGGCGATGATTTTCGATGCCATGGCACGCCATGGGCGAGGGGTAATGTCAATGTCTGCGTTCAGGAACGTGATCGGCCAGCACGATGCTTTCGTGGAACGTTCCCCGACAACACTCGAGTTCAAGTGGCCGAAAGGACTCTCAGGACGGTTTCCCACTCTAAAGGAGGCCGAAAACTATCTCATTGAGGAAGCGCTGGCGCGGGCAAAGGGAAATCAGGGCGCCGCCGCATCCTTTCTGGGCATAAGTCGCCAGGCCCTCAATCAGAGACTCGCCAGAATGCATGCTGACAAGGGCGAGGGGTAA
PROTEIN sequence
Length: 480
MDHKNHAKNFASSVIVLVDDEPEILFSSAAILRRAGLENLHTLEDNRKLLPLLAEQEVAVIVLDLWMPHVSGQELLEEVVSNYPQVPVIVMTAASEIETAVACMKAGAFDYLVKPVEVSRFISCIRRALEMNSLRRENSSLRETLLTGRLKHEDVFSCFITQESRMKAIFGYLDAVAETGQPVLITGETGVGKERLVRALHRLSGRTGDLVAVNVAGLDDMMFSDTLFGHKKGAYTGAEQAREGMIAKAAGGTLFLDEIGDLNLTSQVKLLRLLQEGEYYPLGSDVIRRSDARIVVATNQNLRHFMAEGKFRKDLYYRLSAHQVNVPPLRERKEDIPLLLDHFLAEAATTFNKKKPTLPPELVSYLSVYHFPGNIRELRAMIFDAMARHGRGVMSMSAFRNVIGQHDAFVERSPTTLEFKWPKGLSGRFPTLKEAENYLIEEALARAKGNQGAAASFLGISRQALNQRLARMHADKGEG*