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PLM4_65_coex_sep16_scaffold_1775_6

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(16216..18060)

Top 3 Functional Annotations

Value Algorithm Source
Transmembrane and TPR repeat-containing protein F38B6.6 {ECO:0000313|EMBL:GAM11387.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 619.0
  • Bit_score: 482
  • Evalue 7.30e-133
Tetratricopeptide TPR_1 repeat-containing protein bin=GWC2_Nitrospirae_57_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 597.0
  • Bit_score: 476
  • Evalue 2.80e-131
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 606.0
  • Bit_score: 418
  • Evalue 2.60e-114

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Taxonomy

Geobacter sp. OR-1 → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1845
ATGAGCCAGAAGAAAACAACCAAGCGCGCGGCAAAATCCTTGGCGACTCAACCCGCTGCTGCCTCCACAAGGGGCATCCCTGCTTTTCTCTTCAGCCCGGCATTTCACCTACTGCTGATCTGTATCGCCGGCATAGCGGTCTACGCCAACACACTCAACGCTCCCTTCGTCCTTGATGACATAACATCCATCACCAACAATTCCATCACACGCAAATTTCAGATTGTGCTCAACTCGCGGATTATCAACTACCTCAGCCTGGCTCTCAATTACCGCCTCCATGGCCTCGACGTAACCGGGTACCATGTTGTCAATCTTTGCATCCATTTGGCAACGGGCATGCTTGTCTACACCTTCCTGAGCCTCATTCATAAAACACCAGTGCTGGCAGCCGCAGATTTCAGTAACAGGGAAAAAGAACTGATTGCGCTGTTTGCAGCGCTGTTGTTTATCTGCCATCCAATCCAGACTCAGGCAGTTACCTATATTTCGCAACGGGCAACCAGTCTGGCTACGCTTTTTTATCTTGCCACCCATATACTCTACCTTGCCGCTCGCCTCTGCCAGTCGCGGAAAACAGCAGTAGCCATCGGCACCGCCGCATTCGGGACGGCTCTTCTTGCCATGGCCACCAAGGAAATTGCTTTTACCCTGCCGCTGACGATACTGTTAGTCGAAGTCATTTTTTTCGGCGGCAGTCTGCGACAAAAAGTACTTCCCCTGTCGCTCCTGTTTCTGCCGGCACTGTTCGTACCTCTGGCACTCATTCCGACTCTGGGCGCCAGAGGAAACCTGGCAGAGCTGTTCTCGCAACTTACCTCATTGACAACTAAAATTTCCCGCGGGGAATACCTGCTCACCCAGTTTCGGGTGCTGCTCACCTATCTGCGACTCCTCTTCGTGCCGGTAGGCCAAAACGTTGATTATGACTATCCTGTCTTCACATCGATATCTCCGAGCGTCCTCGCTTCACTCGCCGTGATTATCGCCATCCTTGCACTAGCAGCATATCTTCTCGTCCGTGCGCGGCACAAAAGACAACCCGAGCTCAACCTGATTGCTTTTGGTATCTTCTGGTTTTTTACGTCATTAATCATTGAATCATCCATCATTCCCCTTCCTGATGTTATCTTCGAACATCGCCTCTATTTGCCCTCGGTGGGCTTTTTTGCCGCGGTTGTCACTGCCCTGTTCTCTTGCAAACGTCATTTTCAGCGAAAAACAGCTCCTGCCGCCGGCCTTGTGCTGCCCCTGCTTGTTCTGGCGGTGCTTGTTCTGGCCGGTACAGCAGCCGCCCGGAATGCAGTGTGGCGGGATGAAGTGACTTTCTGGGAGGACATTGTCGCCAAGAGTCCCTTGAAAGTGCGGGCTCATGTCAATCTTGGCAATGCCTATCAGATGCGCGGTCTTTTTGTGGATGCAGCACAGGAATACAAAGAAGTCATCCGCCTCGATCCTAATGATCCGGCTGCTCATATCAACCTTGGTACTATTTTCTATCGTCAGCGGAAATGGGAGGAGGCAGCCCTCTGGTATCGGCAGGCGCTACGCCTCGATCCGGGCAATGCAGCAGCGCACTATAACCTCGGGAAAATTCTGACTGAAGAAGGTAAACTTCCTGAGGCAGAGCAGGAATTACGAGCAGCAATCCACCTCAGTGCGGATTACGATCCGGCCCATAACAGTCTCGGCATCGTCTACTTCAAGCTGCAGCGTTATCCCGAGGCCCTTGCCGAACTCCGTGCTGCAGTACGCCTTAACCCAGGCAACAGCGAAGCGACCAAGAACCTTGAGATTCTTGAACAGGCGCTCAAAGGTAAGAATCCATCTCCTTCCTCACATTAG
PROTEIN sequence
Length: 615
MSQKKTTKRAAKSLATQPAAASTRGIPAFLFSPAFHLLLICIAGIAVYANTLNAPFVLDDITSITNNSITRKFQIVLNSRIINYLSLALNYRLHGLDVTGYHVVNLCIHLATGMLVYTFLSLIHKTPVLAAADFSNREKELIALFAALLFICHPIQTQAVTYISQRATSLATLFYLATHILYLAARLCQSRKTAVAIGTAAFGTALLAMATKEIAFTLPLTILLVEVIFFGGSLRQKVLPLSLLFLPALFVPLALIPTLGARGNLAELFSQLTSLTTKISRGEYLLTQFRVLLTYLRLLFVPVGQNVDYDYPVFTSISPSVLASLAVIIAILALAAYLLVRARHKRQPELNLIAFGIFWFFTSLIIESSIIPLPDVIFEHRLYLPSVGFFAAVVTALFSCKRHFQRKTAPAAGLVLPLLVLAVLVLAGTAAARNAVWRDEVTFWEDIVAKSPLKVRAHVNLGNAYQMRGLFVDAAQEYKEVIRLDPNDPAAHINLGTIFYRQRKWEEAALWYRQALRLDPGNAAAHYNLGKILTEEGKLPEAEQELRAAIHLSADYDPAHNSLGIVYFKLQRYPEALAELRAAVRLNPGNSEATKNLEILEQALKGKNPSPSSH*