ggKbase home page

PLM4_65_coex_sep16_scaffold_4808_4

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(5406..6599)

Top 3 Functional Annotations

Value Algorithm Source
tryptophan synthase subunit beta (EC:4.2.1.20) similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 396.0
  • Bit_score: 760
  • Evalue 1.40e-217
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 396.0
  • Bit_score: 760
  • Evalue 6.80e-217
Tryptophan synthase beta chain Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6M9_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 396.0
  • Bit_score: 760
  • Evalue 4.90e-217

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
GTGAAATTACCCGACAAGCAGGGGCATTTCGGTCAGTTCGGCGGCAGATACGTGTCGGAGACGCTGATGCCGGCACTCTATGAGCTGGAAGAGGCCTACAACCATTACAAAAACGATAGAGAGTTCAAGGCGGAATTCGCCTACTATCTGCGCCAGTATGTGGGGCGACCGAATCCCCTCTACTTTGCGGAAAAACTTACTAAAAAGCTCGGCGGCGCAAGGGTTTACCTGAAGCGTGAGGACCTGAACCATACCGGCGCCCACAAGGTGAACAACACCATCGGTCAGGGACTGCTGGCCCGGCGGATGGGGAAAAAACGGGTGATCGCCGAGACAGGCGCCGGTCAGCACGGTGTTGCCACGGCCACCATCGCCGCCCTTTTCGACATGGAGTGCGAGGTCTTCATGGGGGAGGAGGATATCCACCGCCAGTCGCTCAACGTCTTCCGGATGAAACTTTTGGGTGCAAAGGTTACGCCGGTCACCGCCGGCACTGCCACCCTCAAGGACGCCATGAATGAGGCGCTGCGCAACTGGGTAACCCATGTGGCGACCACGTTTTATGTCATCGGCACCGTCGCCGGTCCCCACCCCTATCCGGTGATGGTGCGCGATTTCCAGTCTATCATCGGCCGCGAAGCGAAGGCCCAGCACAAGAAAGTCGAGGGGAGGCTCCCGGATTACCTGGTGGCGGCCGTAGGTGGCGGGAGCAACGCCCTGGGACTTTTCTATCCATTCCTGAAGGATCGGGAGGTGCGCATGGTCGGGGTTGAGGCGGCCGGCTACGGCATATCCTCAGGCAGGCATGCTGCGCCGCTCTGTGCCGGGAGTGTCGGGGTTTTGCACGGCAATAAGACTTATCTGCTTCAGGATGAATTCGGCCAGATCGCCCACGCCCATTCCATTTCCGCCGGCCTTGACTACCCCGGCGTCGGCCCTGAACACGCATGGCTGAAGGAGACAGGGCGGGCCGACTACGTCTCCGTGACTGACGCTGAGGCCCTGGAGGGATTCAAGATCTTGACCCGGGAAGAGGGGATTCTGCCGGCACTGGAATCCTCCCACGCCATCGCCCATGTGCTGAAGCTGGCGCCGACCCTTGCCAGGGACAAGACTATCGTCGTCTGCCTCTCCGGTAGAGGTGACAAGGATATTCACACGGTGGCCGATGCAATGGGGGTAAGTTTGGCGTAA
PROTEIN sequence
Length: 398
VKLPDKQGHFGQFGGRYVSETLMPALYELEEAYNHYKNDREFKAEFAYYLRQYVGRPNPLYFAEKLTKKLGGARVYLKREDLNHTGAHKVNNTIGQGLLARRMGKKRVIAETGAGQHGVATATIAALFDMECEVFMGEEDIHRQSLNVFRMKLLGAKVTPVTAGTATLKDAMNEALRNWVTHVATTFYVIGTVAGPHPYPVMVRDFQSIIGREAKAQHKKVEGRLPDYLVAAVGGGSNALGLFYPFLKDREVRMVGVEAAGYGISSGRHAAPLCAGSVGVLHGNKTYLLQDEFGQIAHAHSISAGLDYPGVGPEHAWLKETGRADYVSVTDAEALEGFKILTREEGILPALESSHAIAHVLKLAPTLARDKTIVVCLSGRGDKDIHTVADAMGVSLA*