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PLM4_65_coex_sep16_scaffold_4529_8

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(5396..6211)

Top 3 Functional Annotations

Value Algorithm Source
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23) similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 271.0
  • Bit_score: 395
  • Evalue 1.00e-107
Formamidopyrimidine-DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00103}; Short=Fapy-DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000255|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000255|HAMAP-Rule:MF_00103}; Short=AP lyase MutM {ECO:0000255|HAMAP-Rule:MF_00103};; EC=4.2.99.18 {ECO:0000255|HAMAP-Rule:MF_00103};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 271.0
  • Bit_score: 395
  • Evalue 5.20e-107
Formamidopyrimidine-DNA glycosylase Tax=Geobacter uraniireducens (strain Rf4) RepID=FPG_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 271.0
  • Bit_score: 395
  • Evalue 3.70e-107

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGCCGGAACTGCCGGAAGTTGAAACAGTCCGCCGGGGCATTGCACCGCATCTGGTCGGAAAAGGGATCTGTCGGGTTGTGTTACGCACCGAAAAGCTCCGGCTGCCGATCCCACTGGGACTAGATTCCCGGCTTTCAGGCCAATCTATTCTTGCCCTGGAGCGCCGCGGCAAATACCTCCTCATTCGCTGCAGCAGCGGCACCCTTATCCTCCACCTGGGGATGTCCGGCAATCTGCGCCTGATAACGGCTGCATTGCCAATGGGCAAACACGACCGTCTCGACCTGGTGCTCGACAGCGGCCTCTCCCTGCGCTTCATCGATCCCCGCCGCTTCGGCACCGTCGTCTGGACCGAGGATGATCCGCTCAGCCACCCCCTTTTAGCTGCGCACGGCCCGGAACCGCTGGGAGACGACTTCTCCGGCGACTATCTCTACGGCAAAAGCCGCGGTCGCACCAGAGCAATCAAGCAGTTGATCATGGACAGCCAAATATTGGCGGGGGTTGGGAACATCTACGCCAACGAGGCGCTGTTTCGCGCCGCCATCCTGCCGGGGACAGCTGCAGGCAAACTATCAGCGACACAGTGTCAGCGCCTGGCCGACGCCATCAAGGAAGTGCTGACAGATGCCATCGCCTGCGGCGGCAGCACCCTCGACGATTTCCTCGGTTATGAAGGGAAACCCGGCTACTTCCCCATGAAGTTTGCTGTCTACGGCCGGAGCGGCTCCCCCTGCCCCATCTGCAGCGCTCCCATCCAGCAGAGCCGCCTGGGGGGAAGGTCAACATATTTCTGCAGCAACTGTCAGCGCTGA
PROTEIN sequence
Length: 272
MPELPEVETVRRGIAPHLVGKGICRVVLRTEKLRLPIPLGLDSRLSGQSILALERRGKYLLIRCSSGTLILHLGMSGNLRLITAALPMGKHDRLDLVLDSGLSLRFIDPRRFGTVVWTEDDPLSHPLLAAHGPEPLGDDFSGDYLYGKSRGRTRAIKQLIMDSQILAGVGNIYANEALFRAAILPGTAAGKLSATQCQRLADAIKEVLTDAIACGGSTLDDFLGYEGKPGYFPMKFAVYGRSGSPCPICSAPIQQSRLGGRSTYFCSNCQR*