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PLM4_65_coex_sep16_scaffold_6373_8

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(5694..9194)

Top 3 Functional Annotations

Value Algorithm Source
Alpha amylase, catalytic region Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7H7_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 1163.0
  • Bit_score: 1570
  • Evalue 0.0
Alpha amylase, catalytic region {ECO:0000313|EMBL:ABQ27745.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 1163.0
  • Bit_score: 1570
  • Evalue 0.0
alpha amylase similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 1163.0
  • Bit_score: 1570
  • Evalue 0.0

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3501
ATGAAGAGTAACGGGGATGCGCAGTATTTCCCTTTCAGTATCCAGATAGTGAAAAGTATGTGGGAGTCTCTTGACCTGATGGCGGTTGCCGGAGACGTCCAGTCGAGTCGCATACCGCGGGTCATGTTTTTCCGCCAGCTGGCCGAGCGCCTCAACCTCCGCCCCGGCCATACCGGCCAACCGGTAAAGGCCGGCTTGCTGAACCTGTATGCACTGTACCTGAAAGTGCTCCGTTATCTGGTTGATATCTATACTGAGGAGCAGAACCCCGGTGTCCTTGAAGACGCTCTGATGGCGGCCGGTTACCGCTGCGGCTCGGAGGAACTGGCCCGGCTGCTGGAAAGTTTCGGTGACTACTTCCCGTGCGGGGACCTCCTGAGCGGCGCCGCGGCAAACCCCTCCGTCTGGCTGGCCGGAGACGGCCCCGGGCACGGCCGGGAAAAACTTGGCGTCAAAGAGCTGCTGCTCCTGAATTCTGCGAGGGAGAACCCTGCCCTGGCGAGCTTCAGGGCGCTGCTTGACGATTCGGAGCTGGCGGCGTTGAGCAGCTACAGTCACGCCATCGCCGGCCTGGAACGGGAACTGTCCAAGGCTTCGCCACTGGCGCCCTTCGGCCTCTCCCTGCCTGAGCTGCTGCGGGCTCCCTGCAAGGCAGCGCCCGATTCCCTTGAACGGCAGATGGAGTTCATCCGGAACAACTGGGGAGCCATTCTCCCGCCGGAGCTGCTGGCCGAACTAGCGACCGCCTTTGTCGTACTGGCTGAAGAAGCCCGGATGTTCGCCATGCGGGGAGAGCCGGGCGGCGCCCAGATCCTGGAATTTCTCAAGGGTGGGCGATTGGGAAGGGGTGGCTCCGATTACCCCGAGGATGAACGGTTTTCCCCGGACGCCGACTGGATGGCCAACGTGGTGATGCTCGCCAAGATGTCCTATGTCTGGCTCGACCAGTTGTCCAGGAAGTACCGGTGCCCCATCCACCGTCTCGATCAGGTGCCCGACGAAGAGATTGATATCCTCGCGCGCTGGGGATTCACCGGTCTCTGGCTGATCGGACTCTGGGAGCGCTCCCCGGCCTCACAGCGGGTCAAGCAGATCGCCGGCAACCCGGATGCCATCTCTTCCGCCTACTCCCTCTACGACTATGTCATCGCCGGCGACCTGGGGGGAGAAGAGGCTCTGCAGAACCTGAAGGAACGCTGCCGGCAGCGGGGCATACGCCTGGCGAGCGATATGGTACCGAACCACACCGGCATCTACTCCAAATGGACCCTCGAACACCCTGACTGGTTTGTCCAGCTCGATTACCCGCCGTACCCATCCTACAGCTTCAACGGTCCGGACCTCTCCTTTTCCCCCGAGATCAGCCTCACCATCGAGGACGGCTACTGGGACAAGCGCGACGCAGCGGTGGTGTTCAAACATCATGATCACCGTGATGGCCGGACCCGCTACATTTACCACGGCAACGACGGCACCTCCACCCCCTGGAACGATACCGCCCAGCTCAATTACCTCCTGCCCGCGGTGCGGGAAGCGGTAATCCAGACCATCCTCCACGTTGCCCGCCAGTTTCCGATCATTCGTTTCGATGCGGCCATGACCCTGGCCAAGAGGCACTACCAGCGGCTCTGGTACCCTCAGCCGGGGCACGGCGGAGTCCCGTCCCGGGCCGAGCACGGCATGAGCCGTGAGGAGTTCGATGCCGCATTTCCCGAGGAGTTCTGGCGTCAGGTGGTGGACCGGGTAGCTGCCGAGGCCCCCGACACGCTGCTTCTCGCCGAGGCGTTCTGGCTGATGGAGGGGTATTTCGTCCGCACCCTCGGGATGCACCGGGTTTACAACAGCGCCTTCATGAACATGCTCAAGATGGAGGAAAACGTCAAGTACCGCCAGACCATCAAGAACGTCCTCGAATATGATCACCGCATCCTGCCCCGCTTCGTCAACTTCATGAGCAATCCGGACGAAAAGACTGCGGTTGAGCAGTTCGGCAAGGAAGGGAAATATTTCGGCGCCTGCGTGCTCCTCGTCACCATGCCGGGACTCCCGATGATCGGCCATGGCCAGATCGAGGGTTTCCACGAAAAATACGGCATGGAGTACCGCCGCGCCTACTGGGACGAGTCGGTGGACGAGCACATGGTTAGGTTGCACGAAGAAAAGATCTTCCCGCTGATGGGGAGGCGCCCGCTGTTCAGCGGCTCGGAGAACTTCGTTTTCTACGATTTCTTCGCCGGCGGCACGGTGGACGAAAACGTTTTCGCCTACTCCAACAGGAAAGGCTCAGAGCTGGGAATCATCCTCTATCACAACCGTTTTGCCGAAACCGCGGGGTGGATACGCACCTCCACGGCCATTGCCGAGAAAGACGGGAAGGGTGAAACGCTGCTAGTGCAGAAGACCCTTGGCGAGGCGCTCGGTTTCAACGCCGATGGCCGCTCTTACTACACTTTCCGCGATTATGCGACCGGTCTCGACTATGTCCGTGCAGGACGTGAACTCTGCCAAAAAGGGCTCTTTGTCGAGCTTGAGGCCTTCGAATACCACGCCTTCCTCGATTTCCGCGAGATTGTCGATGATGATTACGGCAGCTGGGGGCAGCTCTGCCATCTCTTGGGCGGCAGGCCGGTGGCGAGCCTCGACGAGGAGCTCAAGCAGGTCAGGTTCAAGGGGGTAATCGACCTGCTGCGAGAACTCCTCGCCCTCCAGCCGGAGCTGTACCCGCCTCCCGGAGATGCAGACGTAAAATCCTTGCAGGAGCAATACTCCGGACTCCTGACGGCATTTTTTACTGCCCTGGCCGAACATGCCGGCGGCAGGGACGATGTCATGGGGATTGTCGCCGCTGTTTGCAGCGAATATGCCGTTGCCGGGATGCTCGCAAGGCCGGAGGCCGGTGTTCCTCAGGCAAAAATGGCCATGGGACCGGTGCAGGAGCTTCTCCAGGGGAGGGTGGGCCGGCTGGTGTTCTTCGCCTATCTCTGCCTCCACCGGACTGGACTGCTGCTGGAGAAAACTGAGTTCCCCGCCGTCTCGGCGGAACTGTGCCACAGGTTCGGCCTCTTGAGGGGGGTTGAAGAGGCACTCTCCGCAGTTCCCCCCGAGGAATTGCCCACCGTGCCCGGACTCGATGGGGCTGGCGCCCTGCTCCTCCTCAGGGTGATGCTGGTGGAGCAGCGCTTCCTGGCCGAACTCACGGAAGCCGGCAGGGAAAAGGCACTGCGCAGATTTGTCAGCGAGCCGCTGGTTGCCCGGTTTCTCCTGGTCCACCGGAGCGGCGCTGCCGATTGGTTCAACCGGGAGCGGTTCGAACTGCTGATGAGCTGGCTGCTCCTTGCGGCTATGATCGAAGCGGGGACGGTTGCTGCCGGCGAAAAGGCGCTGTCTGCCGAAGCGGCAGCGCTCCTGCAGACCATGACCGGCCTTGTCGCTGCGGCCGAAGAGGCCGGCTACCGGGTGGACAGACTCCTAGTGAATACCGCATCTGACGCGCTTATATAA
PROTEIN sequence
Length: 1167
MKSNGDAQYFPFSIQIVKSMWESLDLMAVAGDVQSSRIPRVMFFRQLAERLNLRPGHTGQPVKAGLLNLYALYLKVLRYLVDIYTEEQNPGVLEDALMAAGYRCGSEELARLLESFGDYFPCGDLLSGAAANPSVWLAGDGPGHGREKLGVKELLLLNSARENPALASFRALLDDSELAALSSYSHAIAGLERELSKASPLAPFGLSLPELLRAPCKAAPDSLERQMEFIRNNWGAILPPELLAELATAFVVLAEEARMFAMRGEPGGAQILEFLKGGRLGRGGSDYPEDERFSPDADWMANVVMLAKMSYVWLDQLSRKYRCPIHRLDQVPDEEIDILARWGFTGLWLIGLWERSPASQRVKQIAGNPDAISSAYSLYDYVIAGDLGGEEALQNLKERCRQRGIRLASDMVPNHTGIYSKWTLEHPDWFVQLDYPPYPSYSFNGPDLSFSPEISLTIEDGYWDKRDAAVVFKHHDHRDGRTRYIYHGNDGTSTPWNDTAQLNYLLPAVREAVIQTILHVARQFPIIRFDAAMTLAKRHYQRLWYPQPGHGGVPSRAEHGMSREEFDAAFPEEFWRQVVDRVAAEAPDTLLLAEAFWLMEGYFVRTLGMHRVYNSAFMNMLKMEENVKYRQTIKNVLEYDHRILPRFVNFMSNPDEKTAVEQFGKEGKYFGACVLLVTMPGLPMIGHGQIEGFHEKYGMEYRRAYWDESVDEHMVRLHEEKIFPLMGRRPLFSGSENFVFYDFFAGGTVDENVFAYSNRKGSELGIILYHNRFAETAGWIRTSTAIAEKDGKGETLLVQKTLGEALGFNADGRSYYTFRDYATGLDYVRAGRELCQKGLFVELEAFEYHAFLDFREIVDDDYGSWGQLCHLLGGRPVASLDEELKQVRFKGVIDLLRELLALQPELYPPPGDADVKSLQEQYSGLLTAFFTALAEHAGGRDDVMGIVAAVCSEYAVAGMLARPEAGVPQAKMAMGPVQELLQGRVGRLVFFAYLCLHRTGLLLEKTEFPAVSAELCHRFGLLRGVEEALSAVPPEELPTVPGLDGAGALLLLRVMLVEQRFLAELTEAGREKALRRFVSEPLVARFLLVHRSGAADWFNRERFELLMSWLLLAAMIEAGTVAAGEKALSAEAAALLQTMTGLVAAAEEAGYRVDRLLVNTASDALI*