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PLM4_65_coex_sep16_scaffold_10309_1

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(2..700)

Top 3 Functional Annotations

Value Algorithm Source
RluA family pseudouridine synthase (EC:3.2.1.17) similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 233.0
  • Bit_score: 403
  • Evalue 2.50e-110
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 233.0
  • Bit_score: 403
  • Evalue 1.20e-109
Pseudouridine synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBG9_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 233.0
  • Bit_score: 403
  • Evalue 8.90e-110

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGAAAACATTGAACTGATTTTCCCTGAAAACTCTGAGCCGGAACGGCTTGACAGCTTTATCGCCCGCACGGTCGAGACCATGACCCGCGCCACGGCCCAGCGCCTTATCGAGGCGGGGCATGTGCTGGTCAACGGCAGCCCGCAGAAGCCTTCGCTGAAGCTGAAGGGGGGCGAAGCCCTGTCGCTGACGATTCCCCCCCTTGTTGAGACGGAGACGGCGGCTGAGTCAATTCCCCTTGAGATACTCTTTGAGGACCATGATCTGGTGGTCGTCAACAAGGCGGCCGGTATGGTGGTGCATCCCGGGGCGGGGAACAGCGGCGGGACCCTGGTCAACGCGCTGCTCGGGCATTGTGATGATCTGTCCGGTATCGGCGGCGAGTTGCGTCCCGGCATTGTCCATCGCATTGACAAGGACACCTCCGGGGTCCTCGTGGTGGCGAAAAACGATGCGGCCCACCAGTCACTGGCCGCCCAGTTCAAGGCGCATACCATCAAGCGGGTCTACCTGGCGGTTGTTTACGGCTCGCCGAAAGAAGATAAGGGGCGCCTGGAATCAGAGATCGGCCGCCATCCGGTCGACAGGAAACGGATGTCGGGCAAGGCAAAGCACGGTAAGCATGCGGTCACCCACTGGCGGGTAGTCGGCCGCTATCGCGGCATCAGCCTGATCCGGCTCATGCTGGAAACCGGCCGC
PROTEIN sequence
Length: 233
MENIELIFPENSEPERLDSFIARTVETMTRATAQRLIEAGHVLVNGSPQKPSLKLKGGEALSLTIPPLVETETAAESIPLEILFEDHDLVVVNKAAGMVVHPGAGNSGGTLVNALLGHCDDLSGIGGELRPGIVHRIDKDTSGVLVVAKNDAAHQSLAAQFKAHTIKRVYLAVVYGSPKEDKGRLESEIGRHPVDRKRMSGKAKHGKHAVTHWRVVGRYRGISLIRLMLETGR