ggKbase home page

PLM4_65_coex_sep16_scaffold_11326_1

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: 3..2372

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 768.0
  • Bit_score: 1124
  • Evalue 0.0
Ribonuclease E Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAD1_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 768.0
  • Bit_score: 1124
  • Evalue 0.0
ribonuclease similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 768.0
  • Bit_score: 1124
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2370
GTCGAGGACGGCGAACTCGTCGAGCTGGATATCGAGATTGCCGGCCTTGAACAGACCCGCGGCAACATTTACAAGGGGGTGGTGGTCCGGGTCGAGCCGGGGCTGCAGGCCGCCTTTGTCGACATCGGCCTGAAAAAGCTCGGTTTCCTCCAGATGGGGGAGATTCACCCGGATAACTGGCTCTGGCGGGATGATGTCCCCGAAGATCAGCGACACCGGCGGCCCCGCATCCAGGAGATTCTCCGCCGCGGCCAGGAGCTCATCGTCCAGGTGGAAAAGGGGGAACGGGACAACAAGGGGGCGGCGCTGACCACCTACATCTCCCTGCCGGGCCGTTACATGGTGCTCATGCCGGGGAGCGATTCCGCCGGCATCTCCCGCAAGGTGGAGAGTGAGAGCGAGCGGAAAAAAATGAAGGAACTGGTGGCCAGCCTCGAGATACCCGAGGGGATCGGCTACATCATGAGGACCGAAGCGGCCGGCAGGACCGATGCCGAACTGAAGAAAGACCTGGAGTCCCTGCTCAATCTCAATGAGAGCATCAGGGAAAAGGGGGCTGAGATCAGGGGGGCCGGGCTCATCTACCAGGAATCAGCCCTGGTTATCCGCACCATCCGCGACTATTTCAACGCCGATATCGATGAAGTGCTCGTTGACAGCAAGGATGTCTACCTGCAGGCAAAGGCCTTCTTCAAGGAGACCATGCCCAAGTATGAAAAACTGGTGAAGATGCACCAGGAGAAGCGGCCGATCTTTTCCCGCTACCAGCTGGAAGAGCAGATCGACCTGATCTATGAAAAAAAGGTGCCGCTCAAGTCCGGCGGCTCCATATTCATCGAGCCGACCGAGGCGCTTGTTTCCATCGACGTCAACTCCGGCAAATCGACCGGCGAGAGGGGCATAGAGGACACCGCCTTCAAGTCCAACATGGAGGCGGCCGCGGAAGCTGCCAGACAGCTCCGCCTGCGCGACCTGGGGGGACTGATTGTCATCGATTTCATCGACATGCGTGAGAGAAAACACAACGCCGAGGTGGAGAAGGTGCTTAAAACGGCCCTGAAGAGGGACAAGGCGCGGGTCACCGTCGGCCGGATCTCCCAGTTCGGCCTGCTGGAGATGTCGCGCCAGCGGATCAAGCAGAGCACCAACCAGGCGAGCACCCTCGAATGCGCCCACTGCGAAGGGCGGGGCAAGGTCAAGTCGGTGGAGGCGATGGCGCTCTCCTTCATGCGCAAGGTCCACGCCGCCGCCGCAAAGGGGAACGTTGCCGAGGTGCGCGGCGGGCTGCCGCTGGAGGTGGCCTACTACCTGCTCAATCGGAAAAAACGCGAGCTGGCCCAGATCGAGACCGATTACGACATCGAGGTGACCGTCAAAGGGAAAACGTCCTTCCTCCTCAACCAGATGGAGCTGGAGCTGACGAAACGGGAAAAACCACTTGGGGAAGAAATCGGCGCGGAAAAGGAAGTAACGCTGCCGAAGGCCGCAGAACGGCAGCCTGCGGCTGCCGCGGCAGGAGCCGCGCCGGCTGAAGAAGGAAAAGGGAAGAAAAAGCGGCGGAGAGGGAAGAAGAAGCCGCTTGGCGAAGGTGAGGCCCAGCCGGCTGAAGAGGTGCAAGCGGCGTTGGCCGCGGTGGAAACCGCCGAGGTAGAGCCGGCTCTTGTCGCCGGGCCGGCAGCAGGGGCGGAAGAAGCGCCGGCAGCCGAAGGACAGGCGGAGGAGCATAAAAAGAAACGGCGGCGCAAACGGCGGCGCGGGGCAAAAGCGCCGGCAGTTGAAGGCGCGGTTACGGACGTCCATGCGGAAGGCGAGCCGATTGTTGCCGAGCCTGCAGCAGCTCTGACGGGCGAGGCTGCTCTTGCCACGGAAGGGGAAGAGGCGAAGAAGAAACGGCGGCGCAAACGGCGGCGCGGTGGGAAACCGGCCGGTGGCGAAGGTGCTCCCGGCGAGATTGCTCCGGCGCAGCCAGCCGGCGAGCCGGCCGGGGAGAAGCTTGTGGCTGCGGTTGTGACTGCTGAAGCCGCGCAGCCCGCGGCGGCGAAAAAACCGAAGCAGCCGCGTGCACCGCGCAAGAAAACAACCGTTGAACCGGGCCAGGCGGAAGCGTTGCCTGTCCGGGCGGAAGCGGCAACGCTGTCCGCCGAAGCCCCGGCCAGGCCGAAAAAAACGGCGCGTCCCAAAAAGGTCGCCGAGAGCGTGCCGGCCGTAACGGAAGCCGCCCCTGCCGAGGAAAAACCAGCCAAGCCGAAGCAGCCGCGCACCAGGAAGGCTGCCGTGAAAGCCGTTGCAGAGCCGACAGCCGTTCCTGTTGAAGCAGCGAAGCCGAAGCGGGCGCCACGAAAGAAGAAAGAGGAAGCACCTGCCGAATAA
PROTEIN sequence
Length: 790
VEDGELVELDIEIAGLEQTRGNIYKGVVVRVEPGLQAAFVDIGLKKLGFLQMGEIHPDNWLWRDDVPEDQRHRRPRIQEILRRGQELIVQVEKGERDNKGAALTTYISLPGRYMVLMPGSDSAGISRKVESESERKKMKELVASLEIPEGIGYIMRTEAAGRTDAELKKDLESLLNLNESIREKGAEIRGAGLIYQESALVIRTIRDYFNADIDEVLVDSKDVYLQAKAFFKETMPKYEKLVKMHQEKRPIFSRYQLEEQIDLIYEKKVPLKSGGSIFIEPTEALVSIDVNSGKSTGERGIEDTAFKSNMEAAAEAARQLRLRDLGGLIVIDFIDMRERKHNAEVEKVLKTALKRDKARVTVGRISQFGLLEMSRQRIKQSTNQASTLECAHCEGRGKVKSVEAMALSFMRKVHAAAAKGNVAEVRGGLPLEVAYYLLNRKKRELAQIETDYDIEVTVKGKTSFLLNQMELELTKREKPLGEEIGAEKEVTLPKAAERQPAAAAAGAAPAEEGKGKKKRRRGKKKPLGEGEAQPAEEVQAALAAVETAEVEPALVAGPAAGAEEAPAAEGQAEEHKKKRRRKRRRGAKAPAVEGAVTDVHAEGEPIVAEPAAALTGEAALATEGEEAKKKRRRKRRRGGKPAGGEGAPGEIAPAQPAGEPAGEKLVAAVVTAEAAQPAAAKKPKQPRAPRKKTTVEPGQAEALPVRAEAATLSAEAPARPKKTARPKKVAESVPAVTEAAPAEEKPAKPKQPRTRKAAVKAVAEPTAVPVEAAKPKRAPRKKKEEAPAE*