ggKbase home page

PLM4_65_coex_sep16_scaffold_12188_5

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: 4668..4868

Top 3 Functional Annotations

Value Algorithm Source
Cold shock DNA/RNA-binding protein Tax=Geobacter metallireducens RepID=Q39YU1_GEOMG similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 66.0
  • Bit_score: 129
  • Evalue 7.00e-28
Cold shock-like protein CspLA {ECO:0000313|EMBL:GAM09915.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 66.0
  • Bit_score: 130
  • Evalue 7.50e-28
cold shock DNA/RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 66.0
  • Bit_score: 129
  • Evalue 2.00e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter sp. OR-1 → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGGTAAACGGAACAGTAAAATGGTTTAATGACAGCAAGGGGTTTGGGTTTCTTGAGCAGGAAAATGGCGATGACGTATTCGTCCATTTCTCCGCCATCGCTGGCGACGGTTTCAAATCCCTCGCTGAAGGCGATAGGGTAACGTTTGATCTGGTCAAAGGTCCGAAAGGCCTGCAGGCAGCCAACGTAACCAGAGTTTAA
PROTEIN sequence
Length: 67
MVNGTVKWFNDSKGFGFLEQENGDDVFVHFSAIAGDGFKSLAEGDRVTFDLVKGPKGLQAANVTRV*