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PLM4_65_coex_sep16_scaffold_22162_3

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(1787..2395)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWC2_Geobacteraceae_55_20 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 187.0
  • Bit_score: 224
  • Evalue 8.40e-56
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 198.0
  • Bit_score: 216
  • Evalue 3.80e-54
Tax=GWC2_Geobacteraceae_55_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 191.0
  • Bit_score: 227
  • Evalue 1.10e-56

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Taxonomy

GWC2_Geobacteraceae_55_20_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGAATACACACGACACCGACAGGAACGATGACCAATCCCTTGTGAATGCCTGCCGCAAGGGTGACGTGGCGGCCTTTGAAGGACTGGTGCTGCGTCACCAGCGCATGGTGCTGAATGTAGCCTTCCGCATGCTCGGCAATTATGAGGATGCCTGCGACATAACCCAGAACGCCTTTCTGGCGGCCTATTGCAAGTTCGGCGAGTTCCGCGGTGCGGCCCGGTTCTCGACCTGGCTGACCGCCATCGTGATCAACCTTTCCCGCAACCGGCTGCAACAGCTGAAGAGCCGGCAGCGCCGCGAAGCCTGGTCGCTGGATGACCCGCCGCCCGGAAGCTCAGGCGCCTCACCCTCCGCACTCCGCTCCGAGGCGCCATCGGCCCTGCAACAGCTCGAAGAGGAGGAGCTGCGCCGCGCCGTCCGCCGCTGCATCGAAGCGCTTGATGCCGGTTTTCGCGAGGTGCTGGTGTTGCGGGACATGCAGGAGTTTTCCTATGATGAGGTAGCCGGCGCACTGGGACTTCGGGAGGGGACCGTCAAGTCGCGGCTCTTCCGGGCGCGGGATGCGGTCAAGGACTGTCTGAAACGATCGATGGGGATAGTGCGATGA
PROTEIN sequence
Length: 203
MNTHDTDRNDDQSLVNACRKGDVAAFEGLVLRHQRMVLNVAFRMLGNYEDACDITQNAFLAAYCKFGEFRGAARFSTWLTAIVINLSRNRLQQLKSRQRREAWSLDDPPPGSSGASPSALRSEAPSALQQLEEEELRRAVRRCIEALDAGFREVLVLRDMQEFSYDEVAGALGLREGTVKSRLFRARDAVKDCLKRSMGIVR*