ggKbase home page

PLM4_65_coex_sep16_scaffold_22786_2

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: 841..1872

Top 3 Functional Annotations

Value Algorithm Source
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57) similarity KEGG
DB: KEGG
  • Identity: 83.7
  • Coverage: 343.0
  • Bit_score: 574
  • Evalue 1.60e-161
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01445}; EC=2.3.1.234 {ECO:0000255|HAMAP-Rule:MF_01445};; N6-L-threonylcarbamoyladenine synthase {ECO:0000255|HAMAP-Rule:MF_01445}; Short=t(6)A synthase {ECO:0000255|HAMAP-Rule:MF_01445};; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 343.0
  • Bit_score: 574
  • Evalue 7.80e-161
tRNA N6-adenosine threonylcarbamoyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=TSAD_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 343.0
  • Bit_score: 574
  • Evalue 5.60e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1032
ATGCTGCTGCTTGCCATTGAATCATCCTGTGATGAGACTGCCGCCGCTGTCGTGAAGGACGGCAGAACCGTTCTCTCCAATATCATCGCGTCCCAGATAAGCGTGCATGCAGACTACGGCGGTGTCGTGCCGGAGATAGCCTCACGCAAGCATCTGGAGATGATCAGTGTGGTAATTGAGGAGGCATTGCAGGCCGCTGGTGTTTCCTTTGCCGACATTGAAGGGATTGCCGTCACCCAGGGGCCGGGACTGGCAGGAGCGCTGCTTGTTGGTATTTCCACAGCCAAGGCGCTCGCTTATGCCCTCGGTATCCCCATCACGGGGGTCAACCATATTGAGGCCCACTTGCTGGCCATTTATCTGGAACGTTCGGTTGAATTTCCATTTGTTGCCCTCGCAGTTTCCGGTGGCCATACCCATCTTTACCTTGTGGAAGCGGTGGGCCGTTACAGGACTCTGGGGCAAACAATTGATGATGCAGCTGGCGAAGCCTTTGACAAGGTAGCTAAACTTTTGGGTTTTTCTTATCCAGGCGGAGCGCATATCGACCGACTGGCAGATAGGGGTAATCCTGGTGCGATACGATTCCCCCGGCCGCTGATGCACGACAAAAGCTATAATTTCAGTTTCAGCGGCTTAAAAACCTCGGTTCTAAACTATCTGAAGAAAAATCCGCATGCAATTGAAGGTGATTTCCTGGAAGATCTCTGTGCTTCATTCCAAGCCGCGGTCTGTGATGTTTTGACCGGTAAAGTGGCTGCAATAGTCGCGACAACTGGTGTCAAAAGGGTAGTAGTGGCTGGCGGAGTGGCCTGCAATAGTGGTTTACGTCGCGAAATGGCCCGCTTGGCTGATCAAGAGGGACTGGAACTGCATATTCCTTCGCCGTTACTGTGCTCAGACAACGCAGCCATGATTGCAGTGCCTGGCGATTATTACCTTAAAAACAGTATAATCAGTGGATTTGATTTTGATGCCTTGCCTGTCTGGCCTCTTGACAGCATAGCAGAACGCCTCACTTCGGGATCATGA
PROTEIN sequence
Length: 344
MLLLAIESSCDETAAAVVKDGRTVLSNIIASQISVHADYGGVVPEIASRKHLEMISVVIEEALQAAGVSFADIEGIAVTQGPGLAGALLVGISTAKALAYALGIPITGVNHIEAHLLAIYLERSVEFPFVALAVSGGHTHLYLVEAVGRYRTLGQTIDDAAGEAFDKVAKLLGFSYPGGAHIDRLADRGNPGAIRFPRPLMHDKSYNFSFSGLKTSVLNYLKKNPHAIEGDFLEDLCASFQAAVCDVLTGKVAAIVATTGVKRVVVAGGVACNSGLRREMARLADQEGLELHIPSPLLCSDNAAMIAVPGDYYLKNSIISGFDFDALPVWPLDSIAERLTSGS*