ggKbase home page

PLM4_65_coex_sep16_scaffold_23224_1

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(3..866)

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 interacting domain protein Tax=Geobacter sp. (strain M18) RepID=E8WP05_GEOS8 similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 288.0
  • Bit_score: 488
  • Evalue 3.40e-135
sigma 54 interacting domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 288.0
  • Bit_score: 488
  • Evalue 9.60e-136
Sigma 54 interacting domain protein {ECO:0000313|EMBL:ADW13896.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 288.0
  • Bit_score: 488
  • Evalue 4.80e-135

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter sp. M18 → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 864
ATGGGCAGACTTGATGTAAGGGTCCGGACGAAACTTGACACCAGGGTAATCTACATTTCAAGGGACGATAAAGTCGAAGAAACCGTTACCATAACAGAGCTTAGCCTCAGTGGCGCGCTTGTTTCCGGCCTTTCCACCGAACTCAGCGAATTGTTCACGATCAGACCGATGCTGCCCGGGGTCGGCGAAGTAGAACTATTAGCGAAGATTATCAGGCCGACCAAAGACGGCACGTCCATCCGCCTTTTTTATTCGGACAAAAACACCATGCAGGCGCTGTGGGATCATATCAAAAAGAATTTGATACTCGGCGACAGCTGCCCCTATTGTGGCCATGCCGATGACTCCAGGGAAGGGTCCTGCGAGAAATGCAACTTGTATCTGAATTTCGCAAAAGAGAGTTATCTCGAGAGGGACATTGAAAATACCTTCGCACAACGCCTTCACATCCGCTTGAGCAGGCTCAACCTCGAACATATCCAGAAAATCATCCAATTCGTAGATTCCAAATTACTGAAGATACAGCACCGCTCCCCGGACAAGGAATTCGTCGGGACGTCACCGGGAATGCTGGCGGTATTCTCCATGATCAGGAAGGTCGCCCCAACGGAAATGAGTGTACTCCTCCTTGGTGAGAGCGGAACAGGCAAGGAGCTTACGGTTAAGGCGCTTCACACTTTGAGCGCACGTAAAGACGGTCCCTTTGTTGCGGTCAATTGCGCCGCCATACCGGAGAGCCTGCTCGAAGCAGAGCTTTTCGGCTACGAGAAAGGGGCTTTCACCGGCGCCTATGCCGCAAAAAAAGGTAAGTTCGAATCGGCTGATGGCGGCACGCTGTTTCTGGACGAGATAGGTGACCTTCCG
PROTEIN sequence
Length: 288
MGRLDVRVRTKLDTRVIYISRDDKVEETVTITELSLSGALVSGLSTELSELFTIRPMLPGVGEVELLAKIIRPTKDGTSIRLFYSDKNTMQALWDHIKKNLILGDSCPYCGHADDSREGSCEKCNLYLNFAKESYLERDIENTFAQRLHIRLSRLNLEHIQKIIQFVDSKLLKIQHRSPDKEFVGTSPGMLAVFSMIRKVAPTEMSVLLLGESGTGKELTVKALHTLSARKDGPFVAVNCAAIPESLLEAELFGYEKGAFTGAYAAKKGKFESADGGTLFLDEIGDLP