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PLM4_65_coex_sep16_scaffold_25862_2

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: 326..1522

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylate synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA-uridine isomerase D {ECO:0000256|HAMAP-Rule:MF_01082}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 396.0
  • Bit_score: 647
  • Evalue 8.50e-183
tRNA pseudouridine synthase D Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GB60_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 396.0
  • Bit_score: 647
  • Evalue 6.00e-183
tRNA pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 80.8
  • Coverage: 396.0
  • Bit_score: 647
  • Evalue 1.70e-183

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
GTGCGCACCTTTTTGACAGTCGATCTGCCCGGCACCGGCGGGATAATGAAGGAAACCCCTGAAGACTTCATCGTGGCGGAGATTCCCCTCTACCTTCCCTGCGGCGAGGGGGAGCATACGTTTGCTGAAATCGAGAAGCGGGGGATCACTACCCTTGAGGCGCTTCGTCGGGTGGCGAAAGCCCTAGACGTTGCCGAACGGGATCTGGGGTATGCGGGGATGAAGGATGCGCGGGGAGTAACCCGTCAGACCTTATCGATCCCGCGGGTGCCGCCGGAGCGGGTTCTTGCGTTGGAATTGCCGGGAATCAGGGTGCTCTCGGCCGTCCGGCACAAAAACAAACTGAAGCTTGGCCACCTGCGGGGTAACCGTTTCCGCCTTCGGCTCCGTGAGGTGGCAACCGATGCCGTGGCGAAGGCCTCCGCGGTTCTGGACGTGCTGGCAAGACGGGGGGTGCCGAACTGTTTCGGCGAACAGCGCTACGGCGCCCAGGGTAATTCCCATCTCATCGGCGGAGCCCTCCTGCGTGGCAACTTCCGTGGGGCGGTGGACGCACTCATCGGCAATCCGGCAGCTGTGCGCGACGAGCGCTGGCGCGGCGCCATCGAGGCGTACCAGCGGGGGGACCTGGAGGAAAGCCTGCGGACCTTTCCCGCTGGCTGCCGTAGCGAGCGGGACCTGCTTCATCGCCTGGTGAAACAGCCGGATGACTGGGAAAAGGCCTTCCGTGCGGTGCACCCACGACTGAAGAAGCTCTATCTATCCGCCTACCAGTCGTTCCTTTTCGATCAGCTGCTCGATGGTCGGCTTGACAGGCTCGATGAGCTGATGGACGGCGATCTGGCCTACAAGCACGACAACGGCGCCTGTTTCCTCGTCACTGATGCGGCTGCGGAAGCGACGCGGGCCGCGGCGTTCGACATATCACCCACCGGACCTATGTTCGGCTGCAGGATGACGGAGCCGGCGGGAAGCGTCCGGGAACGGGAATGGCAGCTGCTCGCTGCAGAAGGGATCACCCCCGACAGTTTCAACCTTGCCGGCGGTCTGCGCATGGAAGGGGAGCGCCGGCCACTCCGGGTGCCGCTCCTGGAGCCGAAGGCTGGGCTTGATGCTGAGGGACTGGTGCTGGAATTCGGTCTGCCGCGCGGGTCCTACGCCACAGCGGTGCTACGAGAGATCATGAAAGTTCCATGA
PROTEIN sequence
Length: 399
VRTFLTVDLPGTGGIMKETPEDFIVAEIPLYLPCGEGEHTFAEIEKRGITTLEALRRVAKALDVAERDLGYAGMKDARGVTRQTLSIPRVPPERVLALELPGIRVLSAVRHKNKLKLGHLRGNRFRLRLREVATDAVAKASAVLDVLARRGVPNCFGEQRYGAQGNSHLIGGALLRGNFRGAVDALIGNPAAVRDERWRGAIEAYQRGDLEESLRTFPAGCRSERDLLHRLVKQPDDWEKAFRAVHPRLKKLYLSAYQSFLFDQLLDGRLDRLDELMDGDLAYKHDNGACFLVTDAAAEATRAAAFDISPTGPMFGCRMTEPAGSVREREWQLLAAEGITPDSFNLAGGLRMEGERRPLRVPLLEPKAGLDAEGLVLEFGLPRGSYATAVLREIMKVP*