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PLM4_65_coex_sep16_scaffold_69344_1

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_55_13

near complete RP 48 / 55 MC: 5 BSCG 47 / 51 MC: 5 ASCG 13 / 38 MC: 5
Location: comp(2..235)

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G951_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 78.0
  • Bit_score: 152
  • Evalue 1.20e-34
sigma-54 dependent trancsriptional regulator similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 78.0
  • Bit_score: 152
  • Evalue 3.40e-35
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABQ28319.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 78.0
  • Bit_score: 152
  • Evalue 1.70e-34

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGGAACCGATTGTAACCCTGACGGATAAATGCCGCAAATGTTATTCCTGTGTCCGGAGTTGTCCGGTAAAAGCCATCAAGGTCGAAAAAAACTTCACCGAGATAATCTTTGATCGCTGCATCGGCTGCGGCAACTGCCTCAGTAACTGCCCCCAGCATGCAAAGGTTGTCTGCGACAAGGTGGGGGTGACGGAGCAGTTGCTTGCCTCCGACCAGCCGGTTATTGCGGTTCTC
PROTEIN sequence
Length: 78
MEPIVTLTDKCRKCYSCVRSCPVKAIKVEKNFTEIIFDRCIGCGNCLSNCPQHAKVVCDKVGVTEQLLASDQPVIAVL