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PLM4_65_coex_sep16_scaffold_2597_18

Organism: PLM4_65_coex_sep16_Liptonbacteria_48_7

partial RP 36 / 55 MC: 2 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(16067..16654)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions 13..35 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 28.3
  • Coverage: 184.0
  • Bit_score: 89
  • Evalue 3.10e-15
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 34.4
  • Coverage: 192.0
  • Bit_score: 110
  • Evalue 2.40e-21

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Taxonomy

R_RIF_OD1_12_48_26 → RIF-OD1-12 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGGAAGCCAAAGTGCGCAAATCGCTCTCAATTTCTATCGCGGCGGTTATAATCCTCGCGGGAAGCTTTGTGGCTTTTAGGTTTCTGGGGGCTTCCCAAATCCCCAAAGAATTTCGCGATGCCCGGGATGAGGGGGGAGTTATTTCGGAACGCATCGTGGAAAACGCAAAAAGCGTGGCGGATAGTTTAAACGAGGTGAGTTCTTTGGAGGCGCAGAAGAAATATGACGAAGAAGACGCTAAAATAAGCGACCTGGAGAAACAGAATCAGGCCATGAAAGATGATGCCCTGGCGCTCTCTAAGCAAATGGAGATTATGCTTAAAACCATTCCCGACATCCGTTCCGAAAAAGCCAGGAACACTGCCTTCCAGGCGGTGAATAACGAACTGGCGATTATAACCAACCTCTTAAGTTACGGAGATTTTGTGGAGCGCTTGTTTGGTGTACTCCGCAATCGCTCGCTTAGAAATCGGCAATCCCAAATTGACGGTTGGCTGCATGAGATAAACAACGAAGTTCAGCAAATAAACGACTATAATACCAAAGCCCGGGATGCCTTCGCCCAGTTTGACAGTATAACCAAATAG
PROTEIN sequence
Length: 196
MEAKVRKSLSISIAAVIILAGSFVAFRFLGASQIPKEFRDARDEGGVISERIVENAKSVADSLNEVSSLEAQKKYDEEDAKISDLEKQNQAMKDDALALSKQMEIMLKTIPDIRSEKARNTAFQAVNNELAIITNLLSYGDFVERLFGVLRNRSLRNRQSQIDGWLHEINNEVQQINDYNTKARDAFAQFDSITK*