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PLM0_60_coex_redo_sep16_scaffold_49_24

Organism: PLM0_60_coex_sep16_Chloroflexi_RIF-CHLX_65_9

near complete RP 48 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 11 / 38
Location: comp(23673..24275)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWB2_Nitrospirae_rel_47_37 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) similarity UNIREF
DB: UNIREF100
  • Identity: 35.1
  • Coverage: 171.0
  • Bit_score: 99
  • Evalue 4.00e-18
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 189.0
  • Bit_score: 95
  • Evalue 1.60e-17
Tax=GWB2_Nitrospirae_47_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 35.1
  • Coverage: 171.0
  • Bit_score: 99
  • Evalue 5.60e-18

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Taxonomy

GWB2_Nitrospirae_47_37_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 603
GTGTCGACGGTGCCTGACGGGGGGCAGGAAACGTACGCGCCGGGCTCGCGGGAGGACTTCGATCGCCTCTACCGGAGCGCCTATCCGCGTGTGTACCGCACGCTGGCCGCCATCCTCGGTGACGCGGCCGAAGCCGAGGATTGCGCTCAGGATGCCTTCGTCAAGGCATACCAGGCATGGAAGCGCTGGCGGCCCGACGCCCCGGCTGAGGCCTGGGTCCACCGGATTGCGGTCAACCGGGCGATCTCGTACCGGCGGAGGGCGCGGCTCCGCACCGTCGGCGAGCTCCTGCGCCGGCTGGGCAAGCCCGCGGGAAGTACCGACCCCTCGCACGTCGCGACCCGGCCTGACATTCTGACCGCGCTTCGGTCAATACCTCCCAAGCTCGCTGCAGCTATCGTGCTGCGTCACTACCACGGCTACAACAACCGCGAGATCGCGGCTGCGCTGGGTGTATCGGAGCGCACGATCGGGACCCGCTTGAGCCAGGCTTCAGCGCGCCTGCGAGATTTGCTCGGAGAATCTGCCGCCCCCGGCTTCTCACTTGAGGCTCCGGCCGCGTTGTCTTCTGAGCAGGACACGAGTAGTTATGCGAAGCACTGA
PROTEIN sequence
Length: 201
VSTVPDGGQETYAPGSREDFDRLYRSAYPRVYRTLAAILGDAAEAEDCAQDAFVKAYQAWKRWRPDAPAEAWVHRIAVNRAISYRRRARLRTVGELLRRLGKPAGSTDPSHVATRPDILTALRSIPPKLAAAIVLRHYHGYNNREIAAALGVSERTIGTRLSQASARLRDLLGESAAPGFSLEAPAALSSEQDTSSYAKH*