ggKbase home page

PLM4_65_coex_sep16_scaffold_26379_4

Organism: PLM4_65_coex_sep16Gammaproteobacteria_66_10

near complete RP 47 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 9 / 38
Location: comp(1794..2942)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Fibrisoma limi BUZ 3 RepID=I2GID5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 417.0
  • Bit_score: 400
  • Evalue 1.20e-108
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 405.0
  • Bit_score: 397
  • Evalue 3.00e-108
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 400.0
  • Bit_score: 514
  • Evalue 1.10e-142

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_64_14 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
GTGATCTTCCTCACCGCGCTCACCGATACCTCGGTGAAAGTCCGCGCCTTCCGCGCGGGGGCGGTGGACTACGTCACCAAGCCGTTCGAGCCCGAGGAGCTCCTCGCGCGCGTGCGCACGCACATCAGCCTGCGGCGCGAGATCGAGGCGCACGGGCGGTCGAAGGCGACCATCCGAGCGCTGGTCGAGGAAATGCGGGCGGGCGGCGGGGCGCTCATCGGCGAGTCGGGCGCGCTCGCGCGCGTGCGCGAGCGGATCGCGCAGGTCGCGCCCACCGACAGCACGGTGTTGATCCAGGGCGAGACCGGCACCGGCAAGGAGCTGGTGGCGCGCGCCGTTCACGAGGCGAGCGCGCGGCGCGAGCGGCCGCTGGTGAAGCTCAACTGCGCCGCGCTGCCGCGCGAGCTGGTGGAGAGCGAGCTGTTCGGCCACGAGAAGGGCGCCTTCACGGGCGCGCTGCAGCAGCGCCGCGGCCGCTTCGAGCTGGCCGACGGCGGCACGCTGTTCCTCGATGAGGTCGGCGAGCTGCCGCTAGAGGCGCAGGCCAAGCTGCTGCGCGTCCTGCAGGAGCGCGAGTTCGAGCGCGTCGGCGGCACGCGCAGCCTGCGCACGGATGTGCGGGTGATCGCCGCGACCAACCGCGACCTGCAGGCCCGGGTCGCCACCGGCGCCTTCCGCTCCGATCTGTACTACCGCCTCAACGTGTTCCCCATCCCCGTGCCAGCGCTGCGCGAGCGGCGCGACGACATTCCCATCCTGGTGCGCCATTTCGCGGCCAAGGCCGCGCGCAAGCTGGGCCGGGCGCTGGACGGGATCGCGCCGCAGTTCATCGAGCGCGCGGCCGCCTACGACTGGCCGGGCAACATCCGCGAGCTCGAGAACATGGTCGAGCGCGCGGCGATCGTGTCGCGCGGCGAAGTGCTCGACGGGAGCGCGTTCTTCGCCGAGACGGCCGCCGGCGGTGCCGTGGCGCCCGCGCCAGCCGGCAAGGGAACGCTCGAAGAAATCGAGCGCGCCCACATCCTGCAAGTCCTCGGGTCGACCCGCTGGGTGATCGAGGGCGAGCGCGGCGCGGCCCGCATCCTCGGGCTCAACCCGAGCACACTGCGCGGGCGCCTGCGCAAACTCGGCATCCGCAAGCCTTCTTAG
PROTEIN sequence
Length: 383
VIFLTALTDTSVKVRAFRAGAVDYVTKPFEPEELLARVRTHISLRREIEAHGRSKATIRALVEEMRAGGGALIGESGALARVRERIAQVAPTDSTVLIQGETGTGKELVARAVHEASARRERPLVKLNCAALPRELVESELFGHEKGAFTGALQQRRGRFELADGGTLFLDEVGELPLEAQAKLLRVLQEREFERVGGTRSLRTDVRVIAATNRDLQARVATGAFRSDLYYRLNVFPIPVPALRERRDDIPILVRHFAAKAARKLGRALDGIAPQFIERAAAYDWPGNIRELENMVERAAIVSRGEVLDGSAFFAETAAGGAVAPAPAGKGTLEEIERAHILQVLGSTRWVIEGERGAARILGLNPSTLRGRLRKLGIRKPS*