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PLM1_60_coex_sep16_scaffold_8962_2

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: comp(626..1837)

Top 3 Functional Annotations

Value Algorithm Source
pilC; type IV pilus biogenesis protein PilC; K02653 type IV pilus assembly protein PilC bin=bin5_DeltaP species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 399.0
  • Bit_score: 467
  • Evalue 8.70e-129
pilus assembly protein PilC similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 401.0
  • Bit_score: 461
  • Evalue 1.30e-127
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 399.0
  • Bit_score: 474
  • Evalue 9.90e-131

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Taxonomy

RLO_Nitrospinae_45_22 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 1212
ATGAGCACCCGCATGTATCTGTGGGAGGGACGCAGCCGTGGCGGCGTTGTGCACAAAGGGGAGCTCGAAGCCACCACTCGGGATACGGCAGTCGCGACCCTGCGCCAACAGCATATTGTGGTCACTACCATCAAGGCGAAGCCCAAGGGCCTTACCCTGCCAGGATTCGGTGGCAAGGTCTCTGAAAAAGAGCTGGTTCTCTTTACCAGGCAATTTTCGACGATGATCGATGCTGGCTTACCGCTGGTTCAATGTTTGGATATTCTGAGTAAGCAAACTGAGAATAAGGTTTTTTCGAAAACTATTATAGAGATCAAAAAAGAAGTTGAAGCAGGCTCTACTTTTTCTGATGCTCTGCGCAAATATCCGAAAATTTTCGATGATCTCTACGTCAACTTGGTGGAGGCAGGCGAGATCGGCGGCGTGCTCGATACGACGTTTGCTCGCCTGGCGGGGTATATCGAAAAAGCGCGGTCGTTGAAAGGCAAAGTCAAATCGGCGATGATTTATCCCTCAGCCATCATCTTTGTCGCAGTCTCCGTGATCATTTTCTTGATGATTTTCGTGATCCCCGTGTTTGCCGAGATGTTTCAGGATTTCGGCGGCACACTCCCGTGGCCGACCCAGTTTGTCATCAGCCTTAGTAACTTCATAAAGAATTATATTTTGTTCGCAATCCCTGTGCTGATTGCTGCCGTTTTCGTATTCAAGCAGTACTATCGCACCGAATCTGGTAAGCGCATGACCCACCGGACCTTGCTCAAGGTGCCAGTCCTCGGGTCCGTGCTGCAGAAGGCCGCGATTGCCCGCTTCTCCCGCACCTTAAGCACTCTGCTGAGCAGTGGAGTACCGATTATCGATAGCCTGGACATTACTGCTCGCACGGCTGGCAACAAAGTCTTAGAGGATGCCGTCCTGGCATCGATCAGTAGTGTCAAAGAAGGGCAAACGTTGGCGACTCCATTGGCAAAGTATTCGGTGTTTCCTCCCATGGTTGTGCAGATGGTGGAAATCGGTGATGTCACGGGTGAGTTAGATGCCCTGTTAAGTAAAATCGCTGATTTTTACGAAGAGGAAGTTGATCGCGCCGTGGAAGCGCTCACCGCGATGCTCGAGCCTATGATGATGGTATTCCTCGGGGTCGTCCTGGGGTTTATTATCGTGGCGATGTATCTGCCCATCTTTAAAATGGCCTCGCTCGTTGGTGAGTAA
PROTEIN sequence
Length: 404
MSTRMYLWEGRSRGGVVHKGELEATTRDTAVATLRQQHIVVTTIKAKPKGLTLPGFGGKVSEKELVLFTRQFSTMIDAGLPLVQCLDILSKQTENKVFSKTIIEIKKEVEAGSTFSDALRKYPKIFDDLYVNLVEAGEIGGVLDTTFARLAGYIEKARSLKGKVKSAMIYPSAIIFVAVSVIIFLMIFVIPVFAEMFQDFGGTLPWPTQFVISLSNFIKNYILFAIPVLIAAVFVFKQYYRTESGKRMTHRTLLKVPVLGSVLQKAAIARFSRTLSTLLSSGVPIIDSLDITARTAGNKVLEDAVLASISSVKEGQTLATPLAKYSVFPPMVVQMVEIGDVTGELDALLSKIADFYEEEVDRAVEALTAMLEPMMMVFLGVVLGFIIVAMYLPIFKMASLVGE*