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PLM1_60_coex_sep16_scaffold_15816_3

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: 1539..2753

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZ85_THERP similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 296.0
  • Bit_score: 250
  • Evalue 2.80e-63
sigma factor MysA similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 296.0
  • Bit_score: 250
  • Evalue 8.00e-64
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 296.0
  • Bit_score: 250
  • Evalue 4.00e-63

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Taxonomy

Thermomicrobium roseum → Thermomicrobium → Thermomicrobiales → Thermomicrobia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1215
ATGGACAGCGAGGCGTTTGACCCCGCCGCCGAGGCTCCGTTGCTCGGGGAGGAGGACACGGAAGCCCTCTGGATGAATGCTCAGGATAGTGAACCCGAGCGAGACAGGGCGTGTGTACCAGGTCACGATGATCTGATGCGTCAGTACCTCTTCGAAATGGGAGCGTTCGATCGGCTCACCCCGGCGGAGGAAGTGGCTTTGGCGAAGAAAATCGAGCAGGGCCGTGACGGGAGGTCGAGGAAGCCGTCGAGCCGCAAAGCGCCGCTGCTCAGGCAGAGCCAGGAGCCGGCTGATGCACCGGGTCGGCTCTGGACCGAGCATCTCAACGCTGACGAAGCCCGCGCCCACATGATTCGCGCCAACCTGCGCCTCGTGGTCAGCATCGCCAAGCAGTTTGCTGGGCGTGGCCTGGCACTCCTGGACCTCATTCAAGAGGGCAACCTTGGGCTGATGAAGGCTGTCGATCGGTTCGACTGGCGGCGTGGATGCCGTTTCGGGACGTATGCGAGTTGGTGGATCAAGCAGTCGATCCGTCGAGCGATCGGCGATCAGGGTCGAATCGTGCGGTTGCCAGCACACATGACGGAGAGCATCAGTCGTGTACAGCACATGCGGCACGTGTGGGTGCAGATGTATGAGGAAGAGCCGACGGCTGACGAGCTGTCGAAGCTGGCTCGGGTGTCAGAAGAGCGCCTCGAGCAGATCGATCAATTGACCGCGGCTCCCGCCTCACTCGATTGGCTGCTCCCCGATGGTGAACGCACCCTAGGGGATCAACTCCCAGACAGTGCCCAGCTTCCTTGCCTCGAGATCTTCACGGACCGCGAGCGCGATCGCCTTTTGCATCACTCGCTGAGCGAGTTGACCCCTCGCGAACGGCATGTGCTACGCATGCACTTCGGCATTGGACAGCGCCGGGCGCATACCCTGGAAGAAATCGGTCGGAAATTTCACCTGACCCGCGAACGCATCCGCCAGATCGAACTCAACGCGTTAAAGAAGCTGCGCCATGGCGATCGGCGTTGGTCGCTGGAAGAGTTCATCGCGATCGCCTCCGAGAATGGTAGAACAACAGGGTTCATTCCAAAATCCCCTCCGTCACATTATAGTCGCAGTTCCCGAAGGAGTGCCGGTGATTCTCGATATGCATGTGCACACCAATGTCGGGTCGTACGACAGCAACCTCTCACCGCTCGAGCTGATTCACATCGGTAA
PROTEIN sequence
Length: 405
MDSEAFDPAAEAPLLGEEDTEALWMNAQDSEPERDRACVPGHDDLMRQYLFEMGAFDRLTPAEEVALAKKIEQGRDGRSRKPSSRKAPLLRQSQEPADAPGRLWTEHLNADEARAHMIRANLRLVVSIAKQFAGRGLALLDLIQEGNLGLMKAVDRFDWRRGCRFGTYASWWIKQSIRRAIGDQGRIVRLPAHMTESISRVQHMRHVWVQMYEEEPTADELSKLARVSEERLEQIDQLTAAPASLDWLLPDGERTLGDQLPDSAQLPCLEIFTDRERDRLLHHSLSELTPRERHVLRMHFGIGQRRAHTLEEIGRKFHLTRERIRQIELNALKKLRHGDRRWSLEEFIAIASENGRTTGFIPKSPPSHYSRSSRRSAGDSRYACAHQCRVVRQQPLTARADSHR*