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PLM1_60_coex_sep16_scaffold_1664_2

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 701..1243

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA bin=bin7_NC10_sister species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 171.0
  • Bit_score: 215
  • Evalue 3.50e-53
lipopolysaccharide transport periplasmic protein LptA similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 134.0
  • Bit_score: 91
  • Evalue 2.10e-16
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 166.0
  • Bit_score: 218
  • Evalue 7.50e-54

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Taxonomy

R_Rokubacteria_69_13 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGAGACCCCGTTTCGCGAGGACCAGTTTCGCGCTGGGCGCGGTCGTGCTGTGGTCGGCGGCGACGCTGTCGACGGCGGCGTGGGCGCAGCCCGTGCCCTCCCGGCCCCGGCCGGCCCGCCCGGCGGCCACCGCCCAGTCGCCCGCGCCCCGTCCGGACGGCCCGGGCGCGAGCCAGGACGGGCGCAGCGCCCCAGTCACGGTGGACGCCGACCAGCTCGAGAACCTGCAGAAGGAAGGGCTCGTCGTCTTCACCGGCAACGTGGTGGCCAACCAGAACAGCTCGACGCAGTACGCGGACCGCATGGAGGTGTACCTCGACGACAAGGGGAACCGCATCGTCCGCACCGTCTCGACCGGCAACGTGCGGATCATCACCAAGGACTGCCGCACCGGCACCGCGAAGCGCGCCGAGTACTACGACGCCGAGCAGCGCGTCGTCCTCATCGGCAACGCGCGGGTGTGGCGCGACGACAACGTGGTGACCGGAGAGCGGATCACGATCTACCTCGCCGAGGACCGGCCGGCGGGCCAGTGCTCATGA
PROTEIN sequence
Length: 181
MRPRFARTSFALGAVVLWSAATLSTAAWAQPVPSRPRPARPAATAQSPAPRPDGPGASQDGRSAPVTVDADQLENLQKEGLVVFTGNVVANQNSSTQYADRMEVYLDDKGNRIVRTVSTGNVRIITKDCRTGTAKRAEYYDAEQRVVLIGNARVWRDDNVVTGERITIYLAEDRPAGQCS*