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PLM1_60_coex_sep16_scaffold_2520_2

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(635..1141)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_24 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 165.0
  • Bit_score: 286
  • Evalue 1.50e-74
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 174.0
  • Bit_score: 138
  • Evalue 1.10e-30
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 167.0
  • Bit_score: 291
  • Evalue 6.50e-76

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 507
GTGGCTGACGACGAGTTCCGGAACCAGGCCCTGCAGCACCTGGACGCCCTCCATAACCTGGCCGTCTACCTGACCCGGAACGGCTCCGAGGCGGAGGACCTGGTCCAGGAGACCTATGTGCGGGCCATGCGGTTTTCCCACCGGTTCCAGCCGGGAACCCATCTGCGGGCCTGGTTGTTCCAAATATTGAGAAACACGTTCCTGACGTTCTACCGGCTCCGGGAGCGGGAAGCCGCCCTCTCGGAGGACGGGGTCCCGGAAGGCGAGTCGCCGATGTTCCACGACGCCCCCGGGCGGGATAGTGAGAGCGCCGGGGCCCACATGGACCTGGATCGGGCCCTGAGGAAACTGCCCGAGGAGTTCAAGACGCCGCTCCTGCTGGCCGAGGTCGAGGGGCTGGCATTGGAGGATGTGGCGCGCATCATGGACTGCCCCGTGGGCACCGTGAAGTCCCGGATCTTCCGCGCCAAGGAGCGACTGCGCGGCTACCTGAAGGATTACAAATAG
PROTEIN sequence
Length: 169
VADDEFRNQALQHLDALHNLAVYLTRNGSEAEDLVQETYVRAMRFSHRFQPGTHLRAWLFQILRNTFLTFYRLREREAALSEDGVPEGESPMFHDAPGRDSESAGAHMDLDRALRKLPEEFKTPLLLAEVEGLALEDVARIMDCPVGTVKSRIFRAKERLRGYLKDYK*