ggKbase home page

PLM1_60_coex_sep16_scaffold_4892_2

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(926..2311)

Top 3 Functional Annotations

Value Algorithm Source
Cation/multidrug efflux pump; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 430.0
  • Bit_score: 661
  • Evalue 3.60e-187
Cation/multidrug efflux pump similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 430.0
  • Bit_score: 583
  • Evalue 4.60e-164
Tax=CSP1_6_Rokubacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 430.0
  • Bit_score: 660
  • Evalue 1.50e-186

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_6_Rokubacteria → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1386
GTGCAGAAGCTCGCCGAGGTCTGCATCCGCCGCCCCGTCTTCGCCACGATGCTCATCCTCGCGCTCTGCGTGGTGGGCGCGGCCAGCTACTTCCGCCTCGGCGTCGACCGCTTCCCCGCCGTCGATCTGCCCACCGTCACCGTGCGCACCACCCTCGCGGGCGCCTCCACCGAGGAGATGGAGATCCAGGTCTCGCAGCGCATCGAGGAGGTCGTCAACACGGTGGCGGGCATCAGCGAGCTGCGCTCGATCTCCGGGCCGGGCAGCTCGGTGGTGATCGTCACGTTCGAGCTGTCCCGGAACATCGACGTGGCGACCCAGGACGTGCGCGACAAGGTCGCCACCGTGATCCGCAACCTCCCGCGCGACACCCTCGCCCCCATCATCTCCAAGTCGGACAACGAGTCCACGCCGGTGATGACGGTGGCGCTGGCCGGCGCCCTGCCGCTGCGGGAGCTGACCGAGATCGCGGACAAGGTGGTCAAGGTGCGGCTCGAGCGGTCCTCGGGGGTCGGCGAGGTGCGTCTCGTCGGCGGCCTCGAGCGCGCGATCAGCGTGTGGGTGGACGCCGACCGGCTGGCCGCCTACCAGATCCCGATCACCGCGGTGCGCGACGCGATCGTCCGCCAGAACGCCGATCTCCCCGGCGGCAACGTCACCGAGGGCGCGCACGAGGCGGCGCTGCGCACCATGGGCCGGGTCCTGGACCCGAAGGCCTTCGACGACCTGGTCATCGCCACCATCGGCGGCGTGCCGGTGCGCGTGCGCGACGTCGGCCGCGCCGAGGACGGGACCAAGGAGCAGCGCTCGATCGCGCGCCTGGACGGCGTGCCCACCGTGACCCTCGAGGTCCGCCGGCAGTCGGGCGCCAACACGATCGCGGTCATCGAGGCGGCCAAGGCCAACCTGGCCCGGATCGCGGGCCAGCTCCCCCCGGGCGCCCGGCTCGAGGTGATCCGGGACCAGTCGCGTTACATCTACGCGGCGCTGCGCGAGATCAACGTGCACCTGGTGCTGGGCGCCATCCTCGCCTCGCTGGTGGTCCTGGCCTTCATGCGGAGCTGGCGCTCCACCCTCATCGCGGCGGTGGCCATCCCCGCCTCGGTGGTCTCCGCCTTCGGCATGATGTGGGCGCTCAACTTCACCCTGAACAGCGTCACCATGCTGGCCCTCGTGCTCATGGTGGGCATCGTCATCGACGACGCGATCGTGGTGCTCGAGAACATCTTCCGCTTCGTCGAGGAGAAATCGACGACGCGATCGTGGTGCTCGAGAACATCTTCCGCTTCGTCGAGGAGAAGAAGATGGAGCCCTTCGCGGCGGCCCGCGCGGCCACCGCCGACATCGGCCTGGCGGTGCTCGCCACCACCCTCAGCCTGGTCGTGA
PROTEIN sequence
Length: 462
VQKLAEVCIRRPVFATMLILALCVVGAASYFRLGVDRFPAVDLPTVTVRTTLAGASTEEMEIQVSQRIEEVVNTVAGISELRSISGPGSSVVIVTFELSRNIDVATQDVRDKVATVIRNLPRDTLAPIISKSDNESTPVMTVALAGALPLRELTEIADKVVKVRLERSSGVGEVRLVGGLERAISVWVDADRLAAYQIPITAVRDAIVRQNADLPGGNVTEGAHEAALRTMGRVLDPKAFDDLVIATIGGVPVRVRDVGRAEDGTKEQRSIARLDGVPTVTLEVRRQSGANTIAVIEAAKANLARIAGQLPPGARLEVIRDQSRYIYAALREINVHLVLGAILASLVVLAFMRSWRSTLIAAVAIPASVVSAFGMMWALNFTLNSVTMLALVLMVGIVIDDAIVVLENIFRFVEEKSTTRSWCSRTSSASSRRRRWSPSRRPARPPPTSAWRCSPPPSAWS*