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PLM1_60_coex_sep16_scaffold_7360_1

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1..1653)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 545.0
  • Bit_score: 903
  • Evalue 6.50e-260
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 568.0
  • Bit_score: 516
  • Evalue 8.20e-144
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 545.0
  • Bit_score: 903
  • Evalue 9.10e-260

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1653
ATGGCGGACGAATCAAGGATCGCGGAAGAGCCGAAGATCGAGGAGCTGGACAAGCTCATCGCCAAGGGGAAGCAGAAGGGCTTTCTCACCTACGACGAGGTGAACGACGCCCTCCCCTCCGACCTCGTCACCCTCGATCAGCTCGACGACATCATGCTGCTGTTCGGCTCGATGGACATCGAGCTCGTGGACTCGACCAAGGCGGTGCGCCTGCCGTCCGAGATGGCGGCCCAGGCCGCCGATCCCGAGCCCGACGACGAGGAGCCCGAGCCGCGGCGCATCGATCTGACCCCGGGGCCGGTCGGCCGCACCGAGGATCCGGTTCGTCTCTACCTGCGCGAGATGGGCAAGGTGGCCCTCCTCACCCGCGAGGGCGAGATCACGCTCGCCAAGCGCATCGAGGAAGGCAAGGACGAGGCCACCGCCGCGATCCTCTCCACCAGCCTGGCCGTCGAGAAGATCCGGGCCCTCCGCGAGGAGCTGCGCCAGGACATCATCCCGATCAAGGACGTGGTGGATTTCCCGGAAGAGGAGTCCACCGAGGAGAAGGAAGCGGCGCTGCGCCGCTCGGTGATCCGCGAGCTGGGCAACATGGACCGGCTCCTGCGCGAGCGGGAGCAGCTCACGCACCAGTGGCGACGCCTCAAGGCCAAGACCGGGGGGCGGAAGCGAGGCAAGGCCGAGCCGGCGTGGAAACGGGTCGAAGGGCAGGCCGAAGCCAAGAAGAGCAAGGTCCTCTCGATCCTCCGCGGTCTCAACCTCCAGCAGTCCCTCCTCGATCTCTGGGGCAACGATCTCAAGAAGCTGGTCGAGAAGATCCATCGAGCCGAGCGCGAGATCGCGCTCTGGTCGGACGGCAAGCGCCCCGCCCCCACCGCGGTGGACGCGTTCCTCTCCTCGCTGGCCGACGACGATCGCGACGACGGCGACCGCGACCTCTACCAGAAGGCGGCGTCCAAGCATCCCTCGATCAAGGAGCGGCTCGTGTGGGTGGCCCAGCAGAAGATCAAGCGCGCCGAGGAGCTGGCGGACGCCCGGGCCGAGGAGCTCAAGAACATCGTCAAGATCATCAAGCAGGGCGAGGCCAAGGCCGCGCGGGCCAAGAAGGAGATGGTCGAGGCCAACCTGCGGCTCGTGATCTCGATCGCGAAAAAATATACAAACCGAGGACTTCAATTCTTGGATCTGATCCAAGAGGGAAATATCGGCTTGATGAAAGCAGTCGACAAGTTCGAGTACCGGCGCGGGTACAAGTTCTCGACCTACGCCACCTGGTGGATCCGGCAGGCAATTACCAGAGCCATCGCAGACCAGGCCCGCACCATCCGGATCCCGGTGCACATGATCGAGACCATCAACAAGCTCATCCGGACTTCCAGACAGCTTGTTCAAGAGCTGGGGCGCGAGCCCACCCCGGAAGAGATCGCGGTCAAGATGGAAGTGCCGGTGGACAAGGTCCGGAAGGTCCTCAAGATCGCCCAGGAGCCCATCTCGCTCGAGACGCCCATCGGTGAGGAGGAGGACAGCCACCTGGGCGACTTCATCGAGGACAAGCAGGTGGGCTCGCCGGTCGAGAGCATGATCGGCCTCTCCCTGCGGGAGCAGACCAACAAGGTCCTCAACTCGCTGACGCCTCGAGAAGAAAAGGTGCTG
PROTEIN sequence
Length: 551
MADESRIAEEPKIEELDKLIAKGKQKGFLTYDEVNDALPSDLVTLDQLDDIMLLFGSMDIELVDSTKAVRLPSEMAAQAADPEPDDEEPEPRRIDLTPGPVGRTEDPVRLYLREMGKVALLTREGEITLAKRIEEGKDEATAAILSTSLAVEKIRALREELRQDIIPIKDVVDFPEEESTEEKEAALRRSVIRELGNMDRLLREREQLTHQWRRLKAKTGGRKRGKAEPAWKRVEGQAEAKKSKVLSILRGLNLQQSLLDLWGNDLKKLVEKIHRAEREIALWSDGKRPAPTAVDAFLSSLADDDRDDGDRDLYQKAASKHPSIKERLVWVAQQKIKRAEELADARAEELKNIVKIIKQGEAKAARAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRQLVQELGREPTPEEIAVKMEVPVDKVRKVLKIAQEPISLETPIGEEEDSHLGDFIEDKQVGSPVESMIGLSLREQTNKVLNSLTPREEKVL