ggKbase home page

PLM1_60_coex_sep16_scaffold_12250_3

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1590..3236)

Top 3 Functional Annotations

Value Algorithm Source
Thiamine pyrophosphate protein bin=GWC2_Syntrophobacterales_56_13 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 45.4
  • Coverage: 542.0
  • Bit_score: 466
  • Evalue 2.00e-128
thiamine pyrophosphate protein central region similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 552.0
  • Bit_score: 411
  • Evalue 2.80e-112
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 548.0
  • Bit_score: 966
  • Evalue 8.70e-279

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1647
ATGGCCACGATCACGGGATCGGAAGTGCTGGCGCAGGCGCTCAGGTCGCAGGGCGTGGACACGATGTTCTATCTCATGGGCGGCCCCATGCTCGAGACCGAGGCGGCCTGCATCAAGCTGGGCATCCGCGCGATCGACACGCGCCACGAGCAGGCGGCGGCCCTGGCCGCGCATGCGTGGACGCGGGTGACGCGGCGCCCCGGCGTGGCCATGGGCTGCTCGGGCCCCGGCGCCATCAACCTGGCCACCGGCGTGGCCAATGCCTTCACCGACTGCGCCCCGCTCGTCGCCATCGGCGGCTCGAGCCCGCGCGTGTTCCTCGGCATGGAGGCCTTCCAGGAGATCGACCAGGTCGCCCTGATGAAGCCGATCACCAAGTGGACGGAGCGCATCTACGACGCCCGGCGTATCCCGGACGTGGTGGACACCGCCTTCCGCCAGGCGACCAGCGGCCGGCCCGGGCCGGTGTACATCGACATGCCGGGCGACATCCTGGGCGAGAAGGTGGAGGAGGAGCAGCTCCACTATCTGGGCCCCTGGAAGCCGGCGCCGCGCAGCCTGGGCGATCCGAACGCGGTGCGCGAGGCCATCGCGCTGCTCGCGAAGGCCGAGCGCCCGGTGGTCATCGCGGGCAGCGGGGTCTGGTGGTCCGACGGGGCCGCCGCGCTCCAGGCCTTCGTGGAGGCCACCGGCATCCCCTTCTACACCACCCCGATCTCCCGCGGCCTCATCGCGGAGGATCACGAGCTGGCGTTCCTGAACGCGCGCAGCAAGGCCTTCACCGAGGCCGACGTGGTGCTGGCGGTGGGCACGCGCTTCAACTGGGTGATCCAGTTCGGCCGCCCGCCCCGCTTCGCCGCCGACCTGAAGGTGATCCACGTGGACATCAACCCGACCCAGCTCGGCCACAACCGCTCGGTCGACGTGCCCATCGTGGGGGACGCGCGGGCCGTGCTCGAGCAGCTCCGCGTGGAGGCCGAGGGCAAGATCGCGCCCAAGCGCTACGCGGCCTGGACCGGCAAGCTCCGCACGCTCGATGCCGAGAAGGGCGCCGAGCAGGACAAGGCGATGAGCCGGGAGGAGACGCCGATCCACCCGCTGCGGCTCTGCAAGGAGATCCGCGACTTCCTGCGGCGCGACGCGATCCTGGTGGTGGACGGCCAGGAGATCTTGAACTTCGGCCGCCAGGCCATCCCGACCTACGTGGCCGGTCACCGGCTGAACTCCGGCGCCTTTGGAACGATGGGCGTGGGCCTGCCCTTCGGCGTGGGCGCCAAGGTCGCCAAGCCCGACGCGCAGGTGCTGGTGCTGCACGGCGACGGCTCCTACGGCATCAACGCGATGGAGATCGACACCGCGGTGCGCCACAAGATCCCGGTGGTGGTCGTGATCAGCAATAACGGCGGCTGGACCGCGGACGCCCCGTGGACGCGGCCCCTGCCCAAGCCGGGGCGCAACCTCGGCCACACCCGCTACGACCGGGTGGCCCAGGAGCTGGGCGCGCACGGCGAGTACGTGGAGAAGCCGCACGACATCCGCCCGGCGCTCGAGCGCGCGTTCGCCTCGGGCAAGCCGGCGGTGGTCAACGTCATCACTGATTCCAAGGCGCGCGCGACGACGGTGCGGTTCTCGGCGTACACGACGTAG
PROTEIN sequence
Length: 549
MATITGSEVLAQALRSQGVDTMFYLMGGPMLETEAACIKLGIRAIDTRHEQAAALAAHAWTRVTRRPGVAMGCSGPGAINLATGVANAFTDCAPLVAIGGSSPRVFLGMEAFQEIDQVALMKPITKWTERIYDARRIPDVVDTAFRQATSGRPGPVYIDMPGDILGEKVEEEQLHYLGPWKPAPRSLGDPNAVREAIALLAKAERPVVIAGSGVWWSDGAAALQAFVEATGIPFYTTPISRGLIAEDHELAFLNARSKAFTEADVVLAVGTRFNWVIQFGRPPRFAADLKVIHVDINPTQLGHNRSVDVPIVGDARAVLEQLRVEAEGKIAPKRYAAWTGKLRTLDAEKGAEQDKAMSREETPIHPLRLCKEIRDFLRRDAILVVDGQEILNFGRQAIPTYVAGHRLNSGAFGTMGVGLPFGVGAKVAKPDAQVLVLHGDGSYGINAMEIDTAVRHKIPVVVVISNNGGWTADAPWTRPLPKPGRNLGHTRYDRVAQELGAHGEYVEKPHDIRPALERAFASGKPAVVNVITDSKARATTVRFSAYTT*