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PLM1_60_coex_sep16_scaffold_17364_3

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1273..1965)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator bin=GWA2_Methylomirabilis_73_35 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 225.0
  • Bit_score: 380
  • Evalue 6.10e-103
OmpR family response regulator similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 226.0
  • Bit_score: 242
  • Evalue 9.60e-62
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 223.0
  • Bit_score: 387
  • Evalue 7.00e-105

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Taxonomy

R_Rokubacteria_68_19 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGCCGCGCATCCTGATCGTGGACGACGAGCCCGAGATGCTGCGCGGGCTGGAGGACAACCTCCAGTTCGAGGGCTACCAGACCGTCACGGCCGGCGACGGCAAGAAAGGGCTCGCCCTGGCGCTCTCGGAGGCGCCCGATCTCATCCTGCTCGACGTCATGATGCCCGGCATGAGCGGCTGGGACCTCTGCCGCGAGCTGAGGCGGCGGGGCCTCGACGTGCCGGTGATCATGCTGACCGCGCGGGGCGAGGAGGTGGATCGGGTGCTGGGGCTCGAGCTGGGGGCGGACGACTACGTCACCAAGCCCTTCAGCCTGCGCGAGCTGATGGCGCGCATCCGGGCAGTGCTCCGGCGTCCCGGCCCGCGCCAGAAGTTCGAGGAGTTCGCGTTCGGCAGCGTGCGCGTGCACCTGCGGGCGCGGCAGGCCTTCAAGGGGGGCCAGGAGGTGCGGCTCACCCGGAAGGAGTTCGACCTGCTCCGCTACCTGGTGGAACACCCGGGCGAGGTGATCACCCGCGACCGGTTGCTGGACGAGGTGTGGGGCTACGAGCGGTTCCCGACCACGCGGACGGTGGACACGCATATCCTGAGGCTGCGGCAGAAATTCGAGGACGACCCGGAGCGGCCGGCGCATATCCTGACCGCGCACGGCCAGGGCTACCGGTTCGTCACCGAGAGGGGCGCGACATGA
PROTEIN sequence
Length: 231
MPRILIVDDEPEMLRGLEDNLQFEGYQTVTAGDGKKGLALALSEAPDLILLDVMMPGMSGWDLCRELRRRGLDVPVIMLTARGEEVDRVLGLELGADDYVTKPFSLRELMARIRAVLRRPGPRQKFEEFAFGSVRVHLRARQAFKGGQEVRLTRKEFDLLRYLVEHPGEVITRDRLLDEVWGYERFPTTRTVDTHILRLRQKFEDDPERPAHILTAHGQGYRFVTERGAT*