ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

PLM1_60_coex_sep16_scaffold_47341_3

Organism: PLM1_60_coex_sep16_Rokubacteria_71_26

near complete RP 47 / 55 MC: 2 BSCG 43 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 2920..3258

Top 3 Functional Annotations

Value Algorithm Source
DNA mismatch repair protein MutL bin=GWF2_Methylomirabilis_70_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 117.0
  • Bit_score: 127
  • Evalue 7.80e-27
mutL; DNA mismatch repair protein MutL similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 114.0
  • Bit_score: 79
  • Evalue 5.30e-13
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 107.0
  • Bit_score: 129
  • Evalue 2.90e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_68_19 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGCCCTCAGCGGATGTCCAGACCCGACTCTTCCACGAGCCCCCGGCACAGTTCACAACCGCCAACTTCGGGAACGTCATCGGCCAGCTCCAAGACACGTTCGTGGTATCGGCAACGGACGACGAGATCTTCTTCCTGGATCAGCACGTGGCGCACGAGCGCGTGCTGTTCGAGCGGCTGCTGGCCGAGCTGGACGCGGCCCCGCTGGCCTCGCAGGAGCTGCTCTTTCCGCAGCCGGTCGAGCTGGGCGCGGGCCAGGCGGCGCTCGTCCAGGAGTGGACCGAGACGCTCGAGGGCCTGGGCTTCCGGCTCGAGGGCTGGAGCGGCTCCACGGTCGTG
PROTEIN sequence
Length: 113
MPSADVQTRLFHEPPAQFTTANFGNVIGQLQDTFVVSATDDEIFFLDQHVAHERVLFERLLAELDAAPLASQELLFPQPVELGAGQAALVQEWTETLEGLGFRLEGWSGSTVV