ggKbase home page

PLM3-1_170_b2_sep16_scaffold_102_18

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_36_10

near complete RP 35 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 38 / 38
Location: comp(11707..13035)

Top 3 Functional Annotations

Value Algorithm Source
GTP-binding signal recognition particle bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 442.0
  • Bit_score: 738
  • Evalue 2.20e-210
srp; Signal recognition particle 54 kDa protein similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 442.0
  • Bit_score: 709
  • Evalue 5.30e-202
Tax=CSP1_1_Thaumarchaeota similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 442.0
  • Bit_score: 738
  • Evalue 3.10e-210

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_1_Thaumarchaeota → Nitrosopumilales → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 1329
ATGCTTGACATTTTAAAAACAGGCCTTCGGGCGGCACTGAAAAAGATTTTAAATTCGTCAGGCATAGATGAGGCACTCATTAAGGAACTTGCCAAGGACGTCCAAAGAGCACTTTTACAATCAGATGTAAATGTAAAACTAGTCTTTGAAATAACAAAAAACCTAGAACAGAGATCACTAAATGAAACCCCTCCTCCAGGACTTTCTCGAAAAGATCACATCGTAAAGATATTGTATGATGAGCTTGCAAGACTGCTTGGAGTAGAGGAAAAACAATTCTCGTTTCAACCAGGAAAGCTAAACAAGGTGCTTATGCTTGGAATTCAAGGAAGCGGAAAGACTACAATCACTGCCAAATTATCAAAGTTTCTAACCAAACAAGGATATCGTGTTGCAGTAGTTGGAGCTGATACCTACAGACCTGGTGCACTTACACAGCTTAAAACAATGTGTGAAAAAGCAAATGTCGAAGTTTATGGCGAAGAAAACAACAAGGATTCTCCACAAATTGTTAAAAACGGTTTAAAACATTTTGAGAGTTCAACTCTTGATATAATATTAATTGATACTGCTGGACGACACAAGGGAGAAAAAGATCTCTTAGAAGAAATGATACAGATAAGCAAGGTTGCCCAACCGGATCTTGCATTACTAATAATTGATGGAACAATTGGGCAGCAATGTTACAACCAGGCAGAAGCATTTCATAAAATAGTACCTGTTGGAGGAATAATAATCACAAAGCTTGACAGCAGTGCAAAAGGAGGAGGTGCCCTTGCTGCTGCAGCTGCCACTGGAGCTCAGATAATGTACATTGGAACAGGAGAAAGAATTGATGACCTTGAAAAATTCTCTCCAACTAGATTTGTTGGACGACTGCTTGGCATGGGAGACATTCAAGCCCTTTTAGATATGGCAAAGCGGCTTGAAAGCGAGGGCGATGAAGAACGACTAAAACGCATATCGCATGGAAAGATGAACATGGAAGACTTTTACTACCAAATTGAAGAGGCTACAAGAGCTGGCGGTCTACGCAGTATCATGGAGAACATGCCTGGATTTTCAGGAATGGTAAAAGAAGATCAATTAGACCAGCAAGAAGAACGCATGAAGAAATGGCGATTCATAATTCAATCAATGACAAAAGAGGAAAAAGCAGATCCTGACTTGCTAAACGCATCTAGGGTAAAACGAATAGCAAGGGGTTGCGGTTGGTCAGAACACGATGTAAAGGAGCTTTTGAAAGCATACAAAAATTCAAAGGACATGATGAAGGCTTCAAAGGGTAGACAGATGCAAGGACTGCTAAGAAAGATGGGTCTGGGATAA
PROTEIN sequence
Length: 443
MLDILKTGLRAALKKILNSSGIDEALIKELAKDVQRALLQSDVNVKLVFEITKNLEQRSLNETPPPGLSRKDHIVKILYDELARLLGVEEKQFSFQPGKLNKVLMLGIQGSGKTTITAKLSKFLTKQGYRVAVVGADTYRPGALTQLKTMCEKANVEVYGEENNKDSPQIVKNGLKHFESSTLDIILIDTAGRHKGEKDLLEEMIQISKVAQPDLALLIIDGTIGQQCYNQAEAFHKIVPVGGIIITKLDSSAKGGGALAAAAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDIQALLDMAKRLESEGDEERLKRISHGKMNMEDFYYQIEEATRAGGLRSIMENMPGFSGMVKEDQLDQQEERMKKWRFIIQSMTKEEKADPDLLNASRVKRIARGCGWSEHDVKELLKAYKNSKDMMKASKGRQMQGLLRKMGLG*