ggKbase home page

PLM3-1_170_b2_sep16_scaffold_23_14

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_36_10

near complete RP 35 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 38 / 38
Location: 10610..10954

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein Tax=Thaumarchaeota archaeon N4 RepID=V6AUS4_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 67.7
  • Coverage: 93.0
  • Bit_score: 121
  • Evalue 4.30e-25
putative RNA-binding protein, contains TRAM domain similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 105.0
  • Bit_score: 127
  • Evalue 2.20e-27
Putative RNA-binding protein, contains TRAM domain {ECO:0000313|EMBL:AIF83749.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 105.0
  • Bit_score: 127
  • Evalue 1.10e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera evergladensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 345
ATGGTAAAGCAGAAAGGAGGTGCAACGATGAGCTATAACGAAGGCGGTTTTGGCGAAGGCTCTGATAACCGAGGATACGGCGGCAATAGAGGCAACTGCGGCGGTAGACGATTTGATGACAGGCCAAAACCAGTAGAAACCGGAAAAGAATACGATGTATCTATAACGGAAATTAGTAGAAAAGGAGACGGTATCGCAAGAGTAGATGGTTTTGTGATATTTGTCAAAGGTGGGCAAGTAGGACAGAATACAAAAGTAAAAGTCACCCAAGTTGGTGGACGATTTGCTACAGCTGAAGTAATTGGAGAAGGTTCTCCACAACCGGCAGAATCTACTACTGAATAA
PROTEIN sequence
Length: 115
MVKQKGGATMSYNEGGFGEGSDNRGYGGNRGNCGGRRFDDRPKPVETGKEYDVSITEISRKGDGIARVDGFVIFVKGGQVGQNTKVKVTQVGGRFATAEVIGEGSPQPAESTTE*