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This organism can only be binned in the context of its binning project SCN18_25_1_16_R1_B. Please contact the project owner (rohansach@berkeley.edu) to become a member and gain access.

PLM3-1_170_b2_sep16_scaffold_529_39

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_36_10

near complete RP 35 / 55 MC: 1 BSCG 18 / 51 MC: 1 ASCG 38 / 38
Location: 28753..32226

Top 3 Functional Annotations

Value Algorithm Source
Putative SMC domain protein Tax=Thaumarchaeota archaeon N4 RepID=V6ARP3_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 1152.0
  • Bit_score: 1398
  • Evalue 0.0
Putative SMC domain protein {ECO:0000313|EMBL:CDI05406.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 1152.0
  • Bit_score: 1398
  • Evalue 0.0
SMC domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 1152.0
  • Bit_score: 1293
  • Evalue 0.0

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Taxonomy

Thaumarchaeota archaeon N4 → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 3474
TTGGTTCATATTAAAAAAGTAGAGATCTTTGGCTTCAAGTCATTTGGATACAAAAATACAATAGTAAACCTTGAACCTGGCCTTGTGGCTATCTCTGGACCAAACGGATCAGGAAAGAGCAACATACTTGATGCAATTACTTTTGCACTTGGTGAAAACTCTCCAAAAATAATGAGGGTTGATAAATTACGTTCTTTACTTCATGACGTTGAAAACAAGCACCAGGGAACAAAGATAGCGCGCGTTAGCTGCCATTTTGATAACACTGACAGGAAGATTCCTGTAGATTCTAACACAGTTACAATAACAAGAGAGATGGACGAAGCAGGAGAAAACATCTATTATTTGAATCAAAAAAAGATGCAACGAAACCACATACTTGACCTGCTTGAGGTTGCTAACGCAGGTATACACAAGCTCAACATAGTACAACAGGGTACAATTACAAGGATTTCCGAATTTAACGCTGAAGAACGCAGAAGGATAATCGAAGATATCATTGGATTGGCCTACTTTGACGAGAAAAAGACCGAATCCCTAAAGCAACTCGATGAGGCAGACAGGCGACTTGAAATTGCGCTTGCCAGGATGGATGAGATAAAAAAGCGCATAGATGAGCTAGAGGCAGAAAGAAACTATCAGCTAAGGTACGTGTATTTGGATCGCGAACTTGGCAGATTCCATGCTATCCAGGCCTCAAACAAGTTACGCGAGATAGAATCGCAAAAAGTATCAAAGGAAAGAAACCTAAACGCCATTCTTTCTGAATCAAAGAAACTTGAAGAACAACGCAACCAGATAAAAGATGAAATCAAAAAGCTTGAAGACGAAAAGCAAAAGTTCATGGAAGAAGTTAATGCATACAATATTGCAAAAGCTGCAATTGATTCAGAGCTTACTACAGCAATGCAATCATCTGAACACGCAAACAGCAAGATAGCTACAAACACAAGAAGACTTGGTCAGATAGATGCTAGATTGCCAGAAATAGAAACTGAACTAACATCACTACATGAAAAACGTTCTTTTTTAGAATCACAAATTGCACAACTAAAGGAATCTATAAGATCAATTGATGAAACAAAAAGATCTACTAATGCAGAACTTGCTTCCGTTGATTCAGAAATCCATCAAGTTTTAAAACAGCAATCACAAGCTGCGACAAACAGAACTAAAGTAGATGATAAAATAAAAAATCTAACAAACACACTCAACGATGCAAAACTTTCATTATCAAAAATTGAAGCAGAAAGAACTGGCATTGTAAACAAAATAGAACAAAATGCTGCAAAGATCAAATCATTTGGTGCAGAAAAAGAAAAACTATTAGATCTAGAACAGAAGCTCCACATTATCAGAGCAGGACATGAAGCAACAATTAACGAACTAAAATCAAGACTTGTAAACATGACAGAAAAGTATTCAAAGATTGAAAAAGACATTGAAGAAAATTCGCTCATTTTAGAAAAAGCAAGCAAAACTGCGGCGCAACATGAGACAAAGATTCGTGTTGTGAAAGACGTAATGCATGAAGACTATTCTATAGCAAAGCTCAAAGAAGATTCAAAGCGACTTGGAATACAAGGCCTTGTCTATGAAGTTCTCTCATGGGACAAACAATATGAGAGGCCGATTCTTGCTGTAGGCTCTGATTGGCTAAAGGCTCTTGTAGTAAATGATTTTGGTACATTACTTGGGTTAGCTGAATTTGCACAGGAAAAGAAACTGCCAAAGATAAAAATAATCCCACTAGATGCAATTCCAAATTCCAAAGTTGAACTCCCAAAAGAGTCTGGAATTGTAGGTGTACTCTCTGATTACATAAAAAGCGATGACAAATTTATAGCACTCAAGAACTTTGTCTTTGGCAATATCATTCTAGTTGATTCCAAAGAATCCGCTTATGTCTTGTCCAAAAAAGGATACAAAGCAGTAACTACAGACGGGCAGTTCTTTGAAGCAGATGCAAACGCTGTAGTTGTTGATATAAACTCAAAGATATCAAAACTCACAAAAATAATTCTACTTAGCACATCCGTTGATGATATAATTCAGGCGCTAAGTTTGCTTAAAAAATTCATTCAAGATAAAAAACTAAAGCTCAAAAAAATTGAAAGGATCAAAAAAAGTCTTGAAGACAGATATCATGTATCAGAAACTGGTTTTACTAATGTTGACTTGCATTTAACTGACATAAGGACCAAAACAAAATCAATCACTAGTATCGAAGACCAACTTGCATCAAGAATCTCCCAACTTAGACATCATGATGAAAGTCTAAAGACTAATGCAGCAAAGATCGAGTCATATATTGCTTCATTAGAAGAACGCATAACAGTCACAAAAGAAAACTATGCGGAAGAAGAACAATCTAGAATAGCAAACGCACTTGCATCACTTAATGATAAAAAATCTAATATTTTGAGCACACAAACCTTGATTTTAAGCCAGATTAGAGAACAGACTGCCAATCAGACTGAACTTGCAAACAACGAAAATACTGTAAAATCTAGCATGAGGACACTCGATGAGGAACAATCTAGATTAAACCATGAAAAACATGATCTTGAAGTGGAGCTCCATGCAATGACAAAAGAAAAAGAAACAGCAGATGCTGCACTTGTTTCTTTAAGAGAAAAAGAACAACAACTAATATCCACATCTGGAACATCAGTTTCTACATTCAAAGAATACGACGCAAAGCTAAAGGAGCTATATGATGCAGAAAGATCTCTTACAAAAGAAATCAACAATTTCGAAAGACAATCTGATTCTCTTTCTCGTGATGTGCGTGACCTTACAGAAAATGAAGTTAAGATTAGAGCAACACTTGGCTCATATGGTTATGATGAACTTTTAGAAACATTTGATGTAGATCAAATGCTGACTAGACTGGAAACAGAAAAAAAGACATTAAGTGGAACATTGAACACAAAAGCTCCAGAAGCATATGTTGAGATCTCAAACGGATATCGTTCCATGTCAACACGTAAAAACGAACTTGAAGAAGAAAGAAACTCTATTGTGAGATTCATAGAAGCAATTGACAAAGACAAACGCCAAACATTTTTGGAAGCATATGACAAAGTTGATCAAGACATACGCAAAGTTTTCAATACGATGACTGGAGGTAATGCCTGGCTTGAAATACAAAATGAAGACGATATATTCAATTCAGGAATATCATATCTAATACAGTTCCCAGACAAACAGAAAAGAGAATCAACTTCAATTAGCGGTGGTGAAAAAACACTTGCTGCAATCACATTCCTTTTGTCACTGCAGACACTAAAGCCATCGCCTTTCTACTTGCTTGATGAGGTAGATGCAAACCTTGACGCACTGAACACAGAGCGGCTCTCAAAAATTCTTGTAGAACGTTCTGCTGGTAACCAGATTATAATGGTCACACTAAAGGACGCTACTGTACAAAAGGCTCAGCTCATCTACAGCACACAACAAATTGCAAATTAG
PROTEIN sequence
Length: 1158
LVHIKKVEIFGFKSFGYKNTIVNLEPGLVAISGPNGSGKSNILDAITFALGENSPKIMRVDKLRSLLHDVENKHQGTKIARVSCHFDNTDRKIPVDSNTVTITREMDEAGENIYYLNQKKMQRNHILDLLEVANAGIHKLNIVQQGTITRISEFNAEERRRIIEDIIGLAYFDEKKTESLKQLDEADRRLEIALARMDEIKKRIDELEAERNYQLRYVYLDRELGRFHAIQASNKLREIESQKVSKERNLNAILSESKKLEEQRNQIKDEIKKLEDEKQKFMEEVNAYNIAKAAIDSELTTAMQSSEHANSKIATNTRRLGQIDARLPEIETELTSLHEKRSFLESQIAQLKESIRSIDETKRSTNAELASVDSEIHQVLKQQSQAATNRTKVDDKIKNLTNTLNDAKLSLSKIEAERTGIVNKIEQNAAKIKSFGAEKEKLLDLEQKLHIIRAGHEATINELKSRLVNMTEKYSKIEKDIEENSLILEKASKTAAQHETKIRVVKDVMHEDYSIAKLKEDSKRLGIQGLVYEVLSWDKQYERPILAVGSDWLKALVVNDFGTLLGLAEFAQEKKLPKIKIIPLDAIPNSKVELPKESGIVGVLSDYIKSDDKFIALKNFVFGNIILVDSKESAYVLSKKGYKAVTTDGQFFEADANAVVVDINSKISKLTKIILLSTSVDDIIQALSLLKKFIQDKKLKLKKIERIKKSLEDRYHVSETGFTNVDLHLTDIRTKTKSITSIEDQLASRISQLRHHDESLKTNAAKIESYIASLEERITVTKENYAEEEQSRIANALASLNDKKSNILSTQTLILSQIREQTANQTELANNENTVKSSMRTLDEEQSRLNHEKHDLEVELHAMTKEKETADAALVSLREKEQQLISTSGTSVSTFKEYDAKLKELYDAERSLTKEINNFERQSDSLSRDVRDLTENEVKIRATLGSYGYDELLETFDVDQMLTRLETEKKTLSGTLNTKAPEAYVEISNGYRSMSTRKNELEEERNSIVRFIEAIDKDKRQTFLEAYDKVDQDIRKVFNTMTGGNAWLEIQNEDDIFNSGISYLIQFPDKQKRESTSISGGEKTLAAITFLLSLQTLKPSPFYLLDEVDANLDALNTERLSKILVERSAGNQIIMVTLKDATVQKAQLIYSTQQIAN*