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PLM3-1_170_b2_sep16_scaffold_1368

Search features with annotation key words

Displaying items 61-72 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b2_sep16_scaffold_1368_61
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(57740..58297)
DNA (558bp) protein (186aa)
Elongation factor P Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=EFP_ACIC5 bin=16ft_combo_ws3_JS1 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
translation elongation factor P (EF-P)
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1368_62
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(58300..58860)
DNA (561bp) protein (187aa)
Uncharacterized protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDT9_RHOMR
hypothetical protein
Tax=CG_Ignavi_01
PLM3-1_170_b2_sep16_scaffold_1368_63
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(58873..61881)
DNA (3009bp) protein (1003aa)
FAD linked oxidase domain protein Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SSG2_PLAL2
FAD linked oxidase
Tax=CG_Arma_01
PLM3-1_170_b2_sep16_scaffold_1368_64

Not on your lists

comp(61907..62578)
DNA (672bp) protein (224aa)
MIP family channel protein Tax=uncultured bacterium W5-102b RepID=H9BWJ6_9BACT
MIP family channel protein {ECO:0000313|EMBL:AFD03168.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium W5-102b.;"
aqpM; glycerol uptake facilitator protein
PLM3-1_170_b2_sep16_scaffold_1368_65
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(62633..63697)
DNA (1065bp) protein (355aa)
cellulase (EC:3.2.1.4)
Cellulase Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E132_DICTD bin=16ft_combo_ws3_JS1 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1368_66
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

63868..64788
DNA (921bp) protein (307aa)
rocF; arginase (EC:3.5.3.1)
Arginase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9P6_ACIC5 bin=16ft_combo_ws3_JS1 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1368_67
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(64826..65350)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LEP8_9BACT
hypothetical protein
Tax=RBG_16_Zixibacteria_40_9_curated
PLM3-1_170_b2_sep16_scaffold_1368_68
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(65364..66179)
DNA (816bp) protein (272aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B5433
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH37974.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM3-1_170_b2_sep16_scaffold_1368_69
unknown

Not on your lists

comp(66205..66783)
DNA (579bp) protein (193aa)

This feature has no annotations

PLM3-1_170_b2_sep16_scaffold_1368_70
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(66887..67615)
DNA (729bp) protein (243aa)
Tax=RBG_13_RIF03_48_7_curated
PLM3-1_170_b2_sep16_scaffold_1368_71
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

67826..69379
DNA (1554bp) protein (518aa)
id=5223835 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3-1_170_b2_sep16_scaffold_1368_72
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(69376..71142)
DNA (1767bp) protein (589aa)
polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase bin=GWA2_OP3_52_12 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RBG_16_Planctomycetes_64_12_curated
Displaying items 61-72 of 72 in total

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