ggKbase home page
This organism can only be binned in the context of its binning project GWA2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

PLM3-1_170_b2_sep16_scaffold_165_18

Organism: PLM6_170_b2_sep16_Eisenbacteria_67_7

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(13326..13937)

Top 3 Functional Annotations

Value Algorithm Source
Superoxide dismutase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 190.0
  • Bit_score: 240
  • Evalue 1.50e-60
manganese/iron superoxide dismutase similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 187.0
  • Bit_score: 205
  • Evalue 8.70e-51
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 190.0
  • Bit_score: 240
  • Evalue 2.10e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Zixibacteria_42_43_curated → Zixibacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGGCGAAGCACGAAGTGAAGGCGCTCCCCTACAAGAACGACGCGCTGAAGGGGATCGGCGCGAAGACGATGGAGATCCACCACGACAAGCTCTACGCCGGCTACGTCAACAAGCGGAACGAGATCGAGGAGTCGCTCGGCAAGGTGGACCGGAGCAAGGCCAACCAGATCTATAGCGAGATGCGCGGCCTGAAGCACGAGGAAACCTTCGCGGCGAACGGCCAGATCCTGCACGAGATCTACTTCTCCGTGATGGGCGGCGACGGACAGCCGAAGGGTGAGGTCGTGGACAAGATCAAGGAGGACTTCGGCACCTACGCGGCCTGGGAGGAAGACTTCAAGGCCTCGGCGATGTGCGCGCGCGGCTGGGTCGTGCTGGCTTACGATCCCACCGACGGCCGCCTGCACAATTTCATCGGCGACGCCCAGAATCAGGGCGGAGTCTGGGGAACGATCCCCGTCTTGAACGTCGATACGTACGAGCACTCCTATTTCATCGACTACGGCAGCGACCGGAAAGCCTACGTCGAGGCCTTCATGCGGAACATCCATTGGGCCGAGGTGAACCGGAGGTTCGTCGCCGCGACCCAGATGGCGATGGCCAGGAAATAA
PROTEIN sequence
Length: 204
MAKHEVKALPYKNDALKGIGAKTMEIHHDKLYAGYVNKRNEIEESLGKVDRSKANQIYSEMRGLKHEETFAANGQILHEIYFSVMGGDGQPKGEVVDKIKEDFGTYAAWEEDFKASAMCARGWVVLAYDPTDGRLHNFIGDAQNQGGVWGTIPVLNVDTYEHSYFIDYGSDRKAYVEAFMRNIHWAEVNRRFVAATQMAMARK*