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PLM3-1_170_b2_sep16_scaffold_1555_3

Organism: PLM6_170_b2_sep16_Eisenbacteria_67_7

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: 5153..6898

Top 3 Functional Annotations

Value Algorithm Source
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 587.0
  • Bit_score: 656
  • Evalue 2.50e-185
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 596.0
  • Bit_score: 513
  • Evalue 4.30e-143
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 587.0
  • Bit_score: 656
  • Evalue 3.50e-185

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1746
ATGAAGCGGGAGAAGACGGATCGCTTTCACGACCTGAAAGCGCTGGCTGGGAAGCAGCAGTACCTGCTCCACGACCAGATCGAGACGTTTCTGGACGAGAGCGCCTCCGTCGAGGACATGGACGAGGTCTACATCAAGCTCAACGACCTCAAGGTGGACGTCTTCGACACGCACGAGGAAGCTCAGCAGAAGCTGAAGATCAAGCGGCGCGAAGAAAAGCGTCCGGCGGAGAAGCAGGTCCTGCCGCACCCGATGCGCTACGACGACCCGGTCCGCATGTACCTGCGGGAGATGGGTCGCGTTCCCCTCCTCGATCGCGAGGGGGAGGTCGAAATCGCGAAGCGGATCAAGGCGGGAGAGCGGCAGATCTGCACGGCGCTGTTCCGCTCGACCCCGATCCTCAAGGAGCTGATCGGACTCGGCACCAAGCTCAAGCAGGGAAAGATCCGCGTGGAGGACTTCACGCAGATCGACTTCGGCAACTGGAATCCCGAGTTCTCGCCGAAGCGGGAGCGGGCGAGGGTGTTGAAGTCCGTCGATCGGGTCCGTTCGCTCCACGGCAAGCTCGCGAAGTTGCAAGAGAAGTCGGTCCGCCGCCTCTCGGAAGAAAAGCGGAAGGCGCACCTGGACAAGGTCCGGCAGGCGGACGAGGAGCTCCTTCGCGAGCTCTTCGTGCTCAACATCAACGTGAAGCTCATCGACCGCCTCGCGGAGCGGATGAAGGCCCTCTCGAAGCGCGTGGCGGAGGCGGAGATCGAGGTCACCTCGCTGGAGCGTCGCTGGGGTAGGAGCGGTGAGGAGCTGGGCGCACTTCTCAAGCGGGTGAAGAAGAGCCGCAAGGACGCGAAGCAGATCGAAAAGGATTCGCGCCTGAAGCCGATCGACCTCGAGGCCTACGCCACTGCGGTCAAGAATGCGCGCCGCCTGGTCCGCCGCATCGAGCTCGAGGGGAAGCTCACGCGCGAACAGATGCTGGACCTGTCGACCGAGATTCGCTCCGGCGAGATCGCCCGTGACAAGGCGAAGCGCGAAATGATCGAGGCCAACGTGCGGTTGGTGATCTCGATCGCCAAGCGCTACACGAACCGGGGACTCGAGTTCCTCGACCTGATCCAGGAAGGCAACTCGGGGCTGATGCGGGCGGTCGACAAGTTCGACTACCGGAAGGGCTACAAGTTCTCCACGTACGCTACGTGGTGGATTCGGCAGGCGATCACCCGCGCGATCGCGGATCAGGCACGGACGATCCGCGTGCCGGTGCACATGATCGAGGCGATCAACAAGGTGGTCCGCACCTCGAGGAGGCTGGTCCAGGAGCTGGGCCGGGAGCCGACTCCGGAGGAAGTGGCGGAGAAACTCGCCCTTCCGGTGGACAAGATCAAGAGCGTCCTCAAGGCCGCCCAGGAACCGATCTCCCTCGACCGGCCGATCGGGGAGGACGACGACTCCAATCTGGGCGACTTCATCGAGGACACGAGCGTCGTTTCGCCCGCACAGGCCGCGGCGTTCTCGATGCTGAAGGACGAGGTGAACGAGGTGTTGGAGACGCTGAGCAAGCGCGAGGCGAAGGTCATTCGCCTGCGCTTCGGACTCACGGACGACGGCTGCCCCCGCACCTTAGAGGAAGTTGGCGCCACGTTCAACGTGACCCGCGAGCGGATCCGGCAGATCGAGGCCAAGGCGCTGCGCAAGCTGCGCCATCCGACCCGCAGCCGGCGGCTCAAGGGCTACGTGGAAATGATGTGA
PROTEIN sequence
Length: 582
MKREKTDRFHDLKALAGKQQYLLHDQIETFLDESASVEDMDEVYIKLNDLKVDVFDTHEEAQQKLKIKRREEKRPAEKQVLPHPMRYDDPVRMYLREMGRVPLLDREGEVEIAKRIKAGERQICTALFRSTPILKELIGLGTKLKQGKIRVEDFTQIDFGNWNPEFSPKRERARVLKSVDRVRSLHGKLAKLQEKSVRRLSEEKRKAHLDKVRQADEELLRELFVLNINVKLIDRLAERMKALSKRVAEAEIEVTSLERRWGRSGEELGALLKRVKKSRKDAKQIEKDSRLKPIDLEAYATAVKNARRLVRRIELEGKLTREQMLDLSTEIRSGEIARDKAKREMIEANVRLVISIAKRYTNRGLEFLDLIQEGNSGLMRAVDKFDYRKGYKFSTYATWWIRQAITRAIADQARTIRVPVHMIEAINKVVRTSRRLVQELGREPTPEEVAEKLALPVDKIKSVLKAAQEPISLDRPIGEDDDSNLGDFIEDTSVVSPAQAAAFSMLKDEVNEVLETLSKREAKVIRLRFGLTDDGCPRTLEEVGATFNVTRERIRQIEAKALRKLRHPTRSRRLKGYVEMM*