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PLM3-1_170_b2_sep16_scaffold_5430_6

Organism: PLM6_170_b2_sep16_Eisenbacteria_67_7

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 9 / 38
Location: comp(5101..5661)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Plesiocystis pacifica SIR-1 RepID=A6GDP6_9DELT bin=16ft_combo_ws3_JS1 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 177.0
  • Bit_score: 205
  • Evalue 3.70e-50
sigW3; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 177.0
  • Bit_score: 107
  • Evalue 2.30e-21
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 177.0
  • Bit_score: 205
  • Evalue 5.20e-50

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 561
GTGACATTGGACCTGGACCTGGAAGGCGTGCGGCGCAGGGACGCGGGAGCGCTCGTTGCCCTCTTCGAGCGCTATTTCGACCGGTTGTACGGGATCGTGTTCCGGCTGGTCGGCAACCGTTCCGCCTCCGAGGACGCGATCCAGGACGTCTTCTTGAGGATCCACCGAGCGGCGCACCAGCTGGATCCGACTCGAGATCCAGGTCCCTGGCTCATGACGATCGCGACCAACGTTTGTCGCGACCATTGGCGATCGAGCGGGCAGCGGCTCGAGCGCGCGTCCGCCTCGATCGAGGGAAATCCGGGCCTGGCGGAGACGTTGTCGCACGGCGCGAAGAGCCCGGAACTCGAGGCGCAGACCTCCGAGCGCGAGCGCCTGGTTCAGGAAGCAATCCTTCGGTTGCAGGAGCCGTTCCGCGAAGTGATCGTCCTCCGCGAGTACGAAGGCCTGGGATACGGCCAGATCGCGGCGATCACGGGCCACAATGAGACCACCGTCCGGAAGCGCCACTCTCGGGCGTTGGCGGAGCTAGGCAGACAACTCAGCGAGATGGAACTGTGA
PROTEIN sequence
Length: 187
VTLDLDLEGVRRRDAGALVALFERYFDRLYGIVFRLVGNRSASEDAIQDVFLRIHRAAHQLDPTRDPGPWLMTIATNVCRDHWRSSGQRLERASASIEGNPGLAETLSHGAKSPELEAQTSERERLVQEAILRLQEPFREVIVLREYEGLGYGQIAAITGHNETTVRKRHSRALAELGRQLSEMEL*