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PLM3-1_170_b2_sep16_scaffold_5641_4

Organism: PLM6_170_b2_sep16_Nitrososphaera_viennensis_49_7

near complete RP 30 / 55 MC: 1 BSCG 17 / 51 ASCG 35 / 38
Location: comp(1738..2997)

Top 3 Functional Annotations

Value Algorithm Source
truD; tRNA pseudouridine synthase D (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 416.0
  • Bit_score: 617
  • Evalue 2.00e-174
Putative tRNA pseudouridine synthase D {ECO:0000313|EMBL:AFU59548.1}; EC=5.4.99.- {ECO:0000313|EMBL:AFU59548.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 416.0
  • Bit_score: 617
  • Evalue 9.90e-174
Putative tRNA pseudouridine synthase D Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJZ5_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 416.0
  • Bit_score: 617
  • Evalue 7.00e-174

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Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 1260
ATGGCCTCTGTTCCGAAGATCGACAGACTGGCTGGGATAGAATGCTACTGCACAAATTTTGCAGGAACTGGAGGATCGATAAAAAAGGGCAGCGAAGGGTTCAGAGTATCAGAGATTGCCGACGGATCGCTTCAACGCAACATATCGCCAGGGTATAACGATGCTCACCGATATCCTCTTTTTATTCTAGAAAAAAAGGACATGGATTCGAACCACGCCCTTCTTGAGATAGAACGACAGCTGCACCTTAGGTTAAGGGTGATGGGCATCAAGGATGCCAAGGCAGTCACCAGGCAATATGCCGGCATGGACCGGGCAATGAAAAGTCCGCCGGCAGAACTGAAATCGACCCACACCCACCTTAGCCTTGTAGGCTTTACAAGACGCCCGTTGTCCAGAGAATTTCTTGCCGGTAACGCCTTTGAAATAACCATTTATGATGCCGAGTCGTCGGATCTGGCAGGAATTATTCCGCAGATAGAAAAGATCGGCAACTTTTACGGGCTGCAAAGATTCGGAAGCGAAAGGCTCGTAACGCACCTAGTGGGCAGAGAAATAGTGAAGCGTCAATTTAGGCTGGCCGTCGAGCTGTTGCTGTCTTATACCACCGACTATGACACGCCTATGAGCAAAGAGATCAGGACCAAAAGCTCCGATCCAAACAACTATCCAGAACTCCTGAAAACCTTGCCAAGAGGGATGGACATAGAGCGCCTTGTAATGTCCGCGCTCACGAGAGGCGGTGATCACATTTCCGCACTCCGCGCAGTGCCCATTACGATCAGGAGGTTGTTTGTTCAGGCATACCAAGCGTACATCTACAACAGATGCCTCAGTGCCGCAATTCTAGAGGGGGCCGATCTTATCCGCCCCCAGCCGGGCGACCTCTGCTTTGAAATGGAGAACCCGACTACCTTTGGCAGAATAATCAGGTTCGATCACGCGAGCGAGAAAAGCATCATGATTCCGGCCATCAGGATGGCAGGGTTTTCGTTTCAGCCCGGCAAGGGGCGATTTGAAAAAATTACCAGCAATATCCTGGAGGACGAAGGCATTAATCCAAAGGACTTTTACATCAAGGAAATGCAGGAGCTCAGTAACCAAGGTGGTTTCAGACAGGGGCCACTCTTGTGCAGGGATTTTACCATTAGAGACGTTCCTCCCCTGACCTTGTCGTTCAAGCTTCCAAAAGGATCGTACGCGACCACCCTCCTGCGAGAGATAATCAAACCGCCAGATCCGATCAGATCAGGATTCTAG
PROTEIN sequence
Length: 420
MASVPKIDRLAGIECYCTNFAGTGGSIKKGSEGFRVSEIADGSLQRNISPGYNDAHRYPLFILEKKDMDSNHALLEIERQLHLRLRVMGIKDAKAVTRQYAGMDRAMKSPPAELKSTHTHLSLVGFTRRPLSREFLAGNAFEITIYDAESSDLAGIIPQIEKIGNFYGLQRFGSERLVTHLVGREIVKRQFRLAVELLLSYTTDYDTPMSKEIRTKSSDPNNYPELLKTLPRGMDIERLVMSALTRGGDHISALRAVPITIRRLFVQAYQAYIYNRCLSAAILEGADLIRPQPGDLCFEMENPTTFGRIIRFDHASEKSIMIPAIRMAGFSFQPGKGRFEKITSNILEDEGINPKDFYIKEMQELSNQGGFRQGPLLCRDFTIRDVPPLTLSFKLPKGSYATTLLREIIKPPDPIRSGF*