ggKbase home page

PLM3-1_170_b2_sep16_scaffold_10845_5

Organism: PLM6_170_b2_sep16_Thaumarchaeota_Marine_Group_I_34_6

near complete RP 24 / 55 MC: 2 BSCG 16 / 51 MC: 1 ASCG 31 / 38 MC: 1
Location: 3773..4339

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA-binding protein containing KH domain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJU2_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 187.0
  • Bit_score: 186
  • Evalue 1.80e-44
KH domain protein similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 189.0
  • Bit_score: 186
  • Evalue 5.10e-45
KH domain protein {ECO:0000313|EMBL:AIF82713.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 189.0
  • Bit_score: 186
  • Evalue 2.50e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera evergladensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 567
TTGGATAAAAATCATCTCAGTTTCACATTACACATACCCGAAGAAAGGATTTCGGTAGTTATAGGCAATAAGGGAGAAACGAAAAAAGAAATTTGCAAAAAGTGCAATGTAAAGATTGAAATTGAAAGTAAAACAGGCGAGATAGCAGTGTCATCAACATCTAAAAATTTTGATGAATTTGGAGCATTGAAGGCAAGGGATATCATCAACGCTATTTCACATGGTTTTTCTCCAGAAAGGGCACTTAGGATCTTAGATGAGGAAACACTCTTTCAAATCTTGGATCTTCGGAACTTTACAACCTCATCAAATTCCACTCATAGGATCAAAGGAAGAATTATTGGTGAAAAAGGAAAAGCGAGAAAAAATCTCGAAGAGCTGACCAACGCATTTATATCTATATATGGACATACCATCGCTTTGATAGGAAACTATGAAGAAACAAAGTTGGCTATTGACGCAATAATGTTACTAATAAATGGAAGATCTCACAAGACAGTCTATGAAATGCTCTATCAAGCAAAAAGAAGATCAAAGATTGAAAAATTACAACTCTGGGAAAATTAA
PROTEIN sequence
Length: 189
LDKNHLSFTLHIPEERISVVIGNKGETKKEICKKCNVKIEIESKTGEIAVSSTSKNFDEFGALKARDIINAISHGFSPERALRILDEETLFQILDLRNFTTSSNSTHRIKGRIIGEKGKARKNLEELTNAFISIYGHTIALIGNYEETKLAIDAIMLLINGRSHKTVYEMLYQAKRRSKIEKLQLWEN*