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PLM3-1_170_b2_sep16_scaffold_592_12

Organism: PLM6_170_b2_sep16_Deltaproteobacteria_58_13

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 10150..10728

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 185.0
  • Bit_score: 200
  • Evalue 9.40e-49
lptA; lipopolysaccharide ABC transporter periplasmic protein LptA similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 168.0
  • Bit_score: 89
  • Evalue 8.60e-16
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 187.0
  • Bit_score: 217
  • Evalue 1.00e-53

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Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGCGCAAATCGGCGTTTCAGTGGATGTTCGTGGCATGGGTTTTGTTGTCGCCGTCTATGCTCGGGCTGGCCGCGGAAGCCGGCCCTCAAACTAAGGCAAAGCCGGAAAAGAAAAGCGGCACCACGGCTTTCGAGTTCAACCGGAAAGACCCAATTTACATCACCGCCGATTGGATGGAAGTCGATCAGGTAAAAAATGTCATTACCTACAAAGGCCGGGTCGTCATGCTCCAGGCGGACATGACGATGAGGAGTGAGACGCTCACTGCTTACTATGACCCGGAAATGAAGCAGATGAAGCAGATCATCGCGGAGGGCAAAGTCAATGCGGTCCAGGGGAATCGCACGGCGACCGGAGAGAAGGCGGTGTTCGACGACAAGTCCAAGACCGTCACGCTCACAGGAAACCCGGTCATGCGCCAGGGGAACAGCCAAGTGACGGGCACCAAGGTCGTTTATTTCACCGAGCAAGACCGCGCGGTGGCCGAAGGAGACGGGAAGATCAGAGTCCAGGCGACGATCTTTCCCGACGATCTTCAGAGTCAGGACAAAGGGGACGCCGCCGGCAAGCAGAAATGA
PROTEIN sequence
Length: 193
MRKSAFQWMFVAWVLLSPSMLGLAAEAGPQTKAKPEKKSGTTAFEFNRKDPIYITADWMEVDQVKNVITYKGRVVMLQADMTMRSETLTAYYDPEMKQMKQIIAEGKVNAVQGNRTATGEKAVFDDKSKTVTLTGNPVMRQGNSQVTGTKVVYFTEQDRAVAEGDGKIRVQATIFPDDLQSQDKGDAAGKQK*