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PLM3-1_170_b2_sep16_scaffold_561_5

Organism: PLM6_170_b2_sep16_Deltaproteobacteria_58_13

near complete RP 43 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(3800..5479)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor bin=GWD2_Deltaproteobacteria_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 559.0
  • Bit_score: 889
  • Evalue 1.70e-255
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 558.0
  • Bit_score: 619
  • Evalue 9.10e-175
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 559.0
  • Bit_score: 889
  • Evalue 2.30e-255

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Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1680
ATGCTGCCCGCCGAAGTGGTTTCGCCGGACCAGATCGACGACGTCATGTCGATCTTCGGCGAGATGGATATCGAGGTCGTCGATTCCAACGCGCGCGTCACGCTCGGCGGCGCGGGCGACGATCTGGCCGAGGAAGAAGAGGAAGAGGAAAAAGAACTTGACGGCGACGTCGACGGCGACGTGGTCGGCAAAACCGGCGACCCGGTGCGCATGTACCTGCGCGAAATGGGCACCGTATCGCTTTTGAGCCGCGAGGGCGAGGTTGAGATCGCCAAAAAGATCGAAGAAGGCGAGAATCGGGTAATCAATGAAGTGCTTACCAGCCCGCTGGCGCTGACTCATGTTCTCGACCTGGGCGGGAAACTCGCCGAGCGTGAAATTCGCGTTCGGGAGATCATCAAGGAAGACGGCGACGAGGAAGGCGAATATCTGGAGGATGAGGAGGTGCATGAGAAGCGGTTGTTGGAACAGATCGGCAGGATTCGCCGCACGTTCAACGAACGGGAAAAGCTCAAAAAACAGTTGGAGACCAAGCGCGTCTCCGCCCGCAGGCGCCAAGCGGTGGTGTCCAGCTTGGCCAAGCATAATGAAAAGATCATCAACGGTTTGAAGGCCTTGCAGCTCAATCATAGGCAAACGGAAGCCATCGCCGACGGTCTGAAACGGGCCATGGATCGAATGCAGACCCTTGAACGAAGCGTCAAGGAATTCGAGCAGAAAACTGGCAAGGCGGGGCCGGACATTCTCAAACTCGTCGCCGGCATAAACGGGCGGCGCAGGGATTGGCAGCGGCTGATCGGCTCGCTGCGTATGAGCCACGACGCGATACTCAAGATGGCCGAGGACATTAAGAACGCCCGGCGCGACATCAAGCATATTGAAAAGGATCTCGAAATGCCCGCGCCGGAGATCAAGCGCCGGGTGTGGTCGATCATCGAAGGTGAGACCAAGGCAAACTTGGCGAAAAAGGAATTGATCGAAGCCAATCTGCGCCTGGTGGTCAGCATCGCCAAAAAGTACACCAACCGCGGGCTGCAATTTCTCGATTTGATCCAGGAGGGCAATATCGGTTTGATGAAAGCCGTCGACAAGTTCGAATACCAGCGCGGCTACAAGTTTTCGACCTACGCGACCTGGTGGATCCGCCAGGCCATCACCCGGGCGATCGCGGACCAGGCGCGGACGATCAGGATTCCCGTGCACATGATCGAGACGATCAATAAGCTCATCCGCACCTCCCGTTACCTGGTCCAGGAGATCGGCCGGGAGCCGACTCCGGAAGAGATCGCGAGCAAGATGGAAATTCCTCTGGACAAGGTTCGCAAGGTTTTGAAAATCGCCAAGGAGCCCATTTCACTGGAGACCCCTGTGGGTGAAGAGGAGGACAGCCATCTGGGCGACTTCATCGAAGATAAAAGAATCATCACGCCCGCCGACGCCGTCGTGAATATCAACCTGCAGGAGCAAACGAAAAAAGTCCTGGCTACGTTGACTCCGCGCGAGGAACAGGTGTTGCGCATGCGCTTCGGCATCGGCGAAAAGTCCGATCACACCCTCGAAGAGGTAGGCCAAAAGTTCACGGTGACCCGCGAGCGCATCCGTCAAATCGAAGCCAAGGCATTGCGCAAGTTGCGCCACCCAAGCCGGAGCAAGCGCCTTAAGAGTTTCATGGAAACCTAA
PROTEIN sequence
Length: 560
MLPAEVVSPDQIDDVMSIFGEMDIEVVDSNARVTLGGAGDDLAEEEEEEEKELDGDVDGDVVGKTGDPVRMYLREMGTVSLLSREGEVEIAKKIEEGENRVINEVLTSPLALTHVLDLGGKLAEREIRVREIIKEDGDEEGEYLEDEEVHEKRLLEQIGRIRRTFNEREKLKKQLETKRVSARRRQAVVSSLAKHNEKIINGLKALQLNHRQTEAIADGLKRAMDRMQTLERSVKEFEQKTGKAGPDILKLVAGINGRRRDWQRLIGSLRMSHDAILKMAEDIKNARRDIKHIEKDLEMPAPEIKRRVWSIIEGETKANLAKKELIEANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQEIGREPTPEEIASKMEIPLDKVRKVLKIAKEPISLETPVGEEEDSHLGDFIEDKRIITPADAVVNINLQEQTKKVLATLTPREEQVLRMRFGIGEKSDHTLEEVGQKFTVTRERIRQIEAKALRKLRHPSRSKRLKSFMET*